Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00720 ATGAGTGACCCAAATCCTGAGAGTAATATTCCACAGTCTTCTCAAAGGTGTGCTGTTAGGCCGAGAAGGCCTCGGATTCTGCTCGGTGCTTGCGGGTGCACTGATGCTGCAAAATTTGCGCTTCTTTGTCATTTTTTTAGGAGATGGGCAAGCATAGAAGTTGTTATGACACGAGCCTCGATACCTTTTATTGAAGTTTCACAAACTCCCCGTCCAGTTTATTTTAATCCTAGGAAAACTGCTTCTCATCATCTGGAATGGGCTGATGTCTTTGTCATTGCTCCATTGTCTGCAAATACCCTTGCCAAGATTGCGCAAGGGATATGTGACAATTCTTTGACCGAAGTTGTGCGAGGTTGGGACCCTAACAAGCCATTTTACGTTGCACCTGCCATAGATCCTGTTACGTGGAATAATCCTTTGACAAGACAATATCGCAAAAGATGCGATGAACTTGGCATTAATATCATCGATCCCTCTCCACGGGGTGAAATGGCTGACCCTACTGAAATTTCTTACATTGTCAAAATCTCTAATGAAGAGATTTGGGACTAA 555 0.436 MSDPNPESNIPQSSQRCAVRPRRPRILLGACGCTDAAKFALLCHFFRRWASIEVVMTRASIPFIEVSQTPRPVYFNPRKTASHHLEWADVFVIAPLSANTLAKIAQGICDNSLTEVVRGWDPNKPFYVAPAIDPVTWNNPLTRQYRKRCDELGINIIDPSPRGEMADPTEISYIVKISNEEIWD 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00720 184 Pfam Flavoprotein 25 175 IPR003382 GO:0003824
Vian2g00720 184 Gene3D - 9 181 IPR036551 GO:0003824
Vian2g00720 184 SUPERFAMILY Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 23 172 IPR036551 GO:0003824
Vian2g00720 184 PANTHER HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY 20 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00720 Vian-Chr2 9902450 9903263 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00720 K01598 - gmx:100812130 162.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00720 2 9902450 9903263 Vian9g00792 9 11081771 11083186 PCT