Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00677 ATGTCTAAGTCTGAATATGTTGTTGAGCTTCCTATTTTAGACATTTCTCAGCCATTACAACCATCTTCTCTAACCTCTCTCTCTAAAGCCTGCAAAGATTGGGGATTTTTCCACATAATCAATCATGGAATCTCCAAAGATCTTTGCAGCCAGATTCATTATTTATCTAAATACCTCTTCAGCCTCCCTTCTGAGGCTAAACTTAAACTTGGTCCTTTCTCTTCTATAAAGTCTTACACCCCTCACTTCATTGCCTCTCCATTCTTTGAGAGCCTCAGAATCAATGGACCAAACTTCTATGTTTCTGCTAAGAGCTCTGAAGAAATCCTCTTTGAGAAACAGAATTCCAGATTCAGTGAGACACTGCAAGAGTATTGCAGTAAGATGGCTGATTTGTCAGAGAAAATTCTGAAGGTTGTGTTGATGAGCTTGGAGGATGGATTTGACAGCCTCTTCTATGATGCTGAATTCAATAAGTGTCATGGTTACTTGAGGATAAACAACTACTCTGCTCCAGAAAGTTTGGAGGATGAAGTTGAGGGGCTTGGAATGCACACCGACATGAGTTGTATAACAATCTTGTACCAAGATGAAATTGGAGGGCTTCAAGTGAAGTCACATGAAGGAAAGTGGATAGACATAAGCCCTTCTGAAGGGACACTAGTGGTGAACATAGGAGACATGATGCAAGCGTGGAGCAATGATAAACTTAGATCTTCTGAACATAGAGTTGTTTTGAAGCAACCTTTGAACAGGTTTTCATTGGCCTTCTTTTGGTGCTTTGAGGATGAAAAGGTGGTGATGGCACCAGATGAAGTTGTTGGAGAAGGAAACAAGAGGATGTATAATCCATTTGAGTGCTTGGAATACTTGAAATTCAGAGAGAACAATCAAAGAGGAAGATTTGAAAAAGTTGGGTATACAGTTAAGGATTTTGCAGGAATCAGGTCTCAACTGTGA 960 0.4 MSKSEYVVELPILDISQPLQPSSLTSLSKACKDWGFFHIINHGISKDLCSQIHYLSKYLFSLPSEAKLKLGPFSSIKSYTPHFIASPFFESLRINGPNFYVSAKSSEEILFEKQNSRFSETLQEYCSKMADLSEKILKVVLMSLEDGFDSLFYDAEFNKCHGYLRINNYSAPESLEDEVEGLGMHTDMSCITILYQDEIGGLQVKSHEGKWIDISPSEGTLVVNIGDMMQAWSNDKLRSSEHRVVLKQPLNRFSLAFFWCFEDEKVVMAPDEVVGEGNKRMYNPFECLEYLKFRENNQRGRFEKVGYTVKDFAGIRSQL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00677 319 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 78 IPR026992 -
Vian9g00677 319 Gene3D - 2 293 IPR027443 -
Vian9g00677 319 FunFam Gibberellin 20-oxidase-like protein 2 293 - -
Vian9g00677 319 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 156 262 IPR005123 -
Vian9g00677 319 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 292 - -
Vian9g00677 319 SUPERFAMILY Clavaminate synthase-like 7 298 - -
Vian9g00677 319 Pfam 2OG-Fe(II) oxygenase superfamily 165 258 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00677 Vian-Chr9 8549630 8550784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00677 8 290 Glycosyltransferase AT5G59530 29.054 1.24e-23 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00677 - - gmx:100782766 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00617 2 7538283 7540905 Vian9g00677 9 8549630 8550784 PCT