Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00617 ATGAATCTTTCTCAGCCATTGCAGCCATCTTCTCTATTCTCTCTCTATAAAGCAGCCAAAGATTGGGGGGTTTTCTACATAATCAACCATGGAATCTCCAAAGATCTTTGCAGCCATATCCAATCACTCTCCAAAAACCTCTTCAATCTTCCTTCTGATACTAAACTCAGACTTGGTCCTTTCTCATCTTTGAAATCTTACACACCTCATTTCATTGCCTCTCCATTCTTTGAGAGCTTCCGAGTTAATGGACCCAACTTTTATGTTTCTGCTAACACTTCTTCTGAAATTCTCTTTGACAAAAACGACTCCAAATTCAGTGTGATGATTGAAGAATACTGTAGTAAGATGGAAGATCTGTCAAAGAGAATTGTAAAGATTATGCTGATGAGCTTAGGGGAGGGCATGGAGAAGAAGTTTTATAATTCAGAGTTCAAGAAGTGCCATGGATACTTGAGGATAAACAATTACTCAGGCCCAGATGTTATGGAGGAGGAAGTTGAGGGGCTTGGAATGCACACTGATATGAGTTGTATCACCATATTGTATCAAGATGAGATTGGAGGGCTTCAAGTGAGATCAAAGGAGGGAGAGTGGATTGATATAAGCCCATCAGAGGGAACCCTAGTGTTGAACATAGGAGACATGTTGCAAGCATGGAGCAATGACAAATTAAGGTCTTCAGAACATAGAGTTCTTTTGAAGAATCATTTCAACAGGTTTTCTCTAGCCTTCTTTTGGTGCTTTGAAAATGACAAGGTCATTTGTGCACCGGATGAAGTTCTTGGAGATGGAAACAAGAGGATGTACAAACCATTTGTGTGCTTCGATTATTTGAAATTTAGAGAGAACAATGAAAAGGGAAGATTTGATAAGGTTGGCTTCACAGTCAGAGACTTTGCTGGTATCAAGGCTCAATAA 921 0.3952 MNLSQPLQPSSLFSLYKAAKDWGVFYIINHGISKDLCSHIQSLSKNLFNLPSDTKLRLGPFSSLKSYTPHFIASPFFESFRVNGPNFYVSANTSSEILFDKNDSKFSVMIEEYCSKMEDLSKRIVKIMLMSLGEGMEKKFYNSEFKKCHGYLRINNYSGPDVMEEEVEGLGMHTDMSCITILYQDEIGGLQVRSKEGEWIDISPSEGTLVLNIGDMLQAWSNDKLRSSEHRVLLKNHFNRFSLAFFWCFENDKVICAPDEVLGDGNKRMYKPFVCFDYLKFRENNEKGRFDKVGFTVRDFAGIKAQ 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00617 306 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 15 280 - -
Vian2g00617 306 SUPERFAMILY Clavaminate synthase-like 14 284 - -
Vian2g00617 306 Gene3D - 1 281 IPR027443 -
Vian2g00617 306 Pfam 2OG-Fe(II) oxygenase superfamily 153 246 IPR044861 -
Vian2g00617 306 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 148 250 IPR005123 -
Vian2g00617 306 FunFam Gibberellin 20-oxidase-like protein 1 281 - -
Vian2g00617 306 Pfam non-haem dioxygenase in morphine synthesis N-terminal 12 60 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00617 Vian-Chr2 7538283 7540905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00617 1 278 Glycosyltransferase AT5G59530 27.526 8.79e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00617 - - gmx:100812108 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00617 2 7538283 7540905 Vian2g00617 2 7538283 7540905 ECH
Vian2g00617 2 7538283 7540905 Vian9g00677 9 8549630 8550784 PCT