Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00663 ATGGTTTCAGTTGGAGCTGTTCATAGTGTGGTGTACGTGCTCCTGCTTTCAGTCACTTTGGTTTTGGGTGGGGACATAGTTCACCATGATGATGTTGCCCCCATAAGGCCTGGTTGTGACAACAACTTTGTTTTGGTAAAAGTCCCTACTTGGATTGATGGTGTGGAAAAAAATGAGTATGCTGGTGTTGGTGCAAGATTTGGCCCTACGTTGGAATCAAAAGAAAAACGTGCCAATCTTACCAGAGTTGTCATGGCTGATCCTCCTGATTGTTGTACAAAGCCTAAGAATAAGCTCACCAGTGAGATAATTTTGGTGCACCGAGGGAAATGCAGTTTTACTACAAAGGCGAATATTGCTGATGAAGCTGGTGCTTCAGCCATCCTCATTATAAACTACCGTACAGAACTTTTCAAGATGGTTTGTGAAGAAAATGAAACTGATGTTGATATAGGAATACCTGCTGTCATGCTTCCCCAAGATGCTGGATTGACTTTGGAAAGGCATATTAAAAATAACTCCAATGTGTCCATACAGTTATACTCTCCATTGCGTCCATTGGTTGATGTTGCGGAAGTGTTTTTGTGGCTTATGGCTGTCGGTACCATTTTATGTGCTTCATATTGGTCTGCCTGGAGTGCTAGAGAAGCAGCTATTGAGCAAGAGAAGCTTTTAAAGGATGCTTCAGATGACTATACTAATACAGAAAATGTTGGTTCCAGTGGTTATGTGGAAATTAGTACCATAGCCGCAATCTTATTCGTCGTGATTGCTTCATGTTTCTTGGTTATGCTGTATAAATTAATGTCATTCTGGTTTGTTGAAGTTCTGGTGGTTCTGTTTTGCATTGGTGGGGTAGAGGGACTGCAAACTTGTTTGGTGGCCCTATTATCATGTTTTAGATGGTTTCGCCAACCTGCCCAGACATTTGTGAAGATACCATTCTTTGGAGCTGTCTCATATCTGACACTTGCTGTTACTCCATTCTGCATAGTGTTTGCTGTGGTTTGGGCGGTTTGTCGCCGTGCATCATGGGCTTGGATTGGTCAAGATATCCTTGGTATCACATTGATAATTACAGTTCTTCAGATTGTTCGCATACCAAATCTAAAGGTTGGGACTGTTCTTCTCAGTTGTGCATTCCTATATGACATCTTCTGGGTGTTTGTCTCTAAATGGTGGTTCCATGAGAGTGTGATGATAGTGGTAGCTCGTGGTGATAAGAGTGGAGAAGATGGCATTCCCATGCTTCTCAAGATACCTCGTCTATTTGACCCTTGGGGTGGTTATAGTATCATTGGATTTGGGGACATAATCTTACCAGGACTTATAGTGGCATTTTCACTAAGGTATGATTGGTTGGCAAAGAAGAACCTTCGTGCCGGATACTTCTTGTGGGCAATGACTGCTTATGGTTTAGGTCTCCTCATCACGTATGTGGCTTTGAACTTGATGGATGGGCATGGTCAGCCAGCTTTACTTTATATAGTTCCATTTACACTTGGCACCTTTTTGTCATTGGGAAAAAAGAGAGGTGAGCTCAAGATTTTATGGACAAGAGGGGAACCAGAAAGGCCTTGCTGTCATATCCAAGAGGATAATCAATCAATTAACAGCCACCATTGA 1626 0.4225 MVSVGAVHSVVYVLLLSVTLVLGGDIVHHDDVAPIRPGCDNNFVLVKVPTWIDGVEKNEYAGVGARFGPTLESKEKRANLTRVVMADPPDCCTKPKNKLTSEIILVHRGKCSFTTKANIADEAGASAILIINYRTELFKMVCEENETDVDIGIPAVMLPQDAGLTLERHIKNNSNVSIQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWSAREAAIEQEKLLKDASDDYTNTENVGSSGYVEISTIAAILFVVIASCFLVMLYKLMSFWFVEVLVVLFCIGGVEGLQTCLVALLSCFRWFRQPAQTFVKIPFFGAVSYLTLAVTPFCIVFAVVWAVCRRASWAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKWWFHESVMIVVARGDKSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLIVAFSLRYDWLAKKNLRAGYFLWAMTAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKILWTRGEPERPCCHIQEDNQSINSHH 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00663 541 FunFam Signal peptide peptidase-like 3 45 184 - -
Vian9g00663 541 SMART psh_8 242 511 IPR006639 GO:0004190|GO:0016020
Vian9g00663 541 SUPERFAMILY PA domain 98 136 IPR046450 -
Vian9g00663 541 Gene3D - 41 183 - -
Vian9g00663 541 Pfam Signal peptide peptidase 243 522 IPR007369 GO:0004190|GO:0016020
Vian9g00663 541 PANTHER SIGNAL PEPTIDE PEPTIDASE 68 527 IPR007369 GO:0004190|GO:0016020
Vian9g00663 541 Pfam PA domain 89 166 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00663 Vian-Chr9 8308295 8316401 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00663 K09597 - gmx:100795197 1025.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00663 9 8308295 8316401 Vian9g00663 9 8308295 8316401 ECH
Vian2g00612 2 7446749 7453266 Vian9g00663 9 8308295 8316401 PCT