Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00612 ATGGGTTCACTTGGAGCTTCGTGTGCTCTGTGTTGTTCTCTGTTCATGATATTTTTCACTTTCAGTTTTGCTGGGGACATAGTGCACCATGATAATATTGCTCCCAAGAGACCTGGCTGTGAGAACAACTTTGTCCTGGTTAAAGTTCCAACTTGGATTGATGGTGTGGAAAGCTGTGAGTATGTTGGAGTTGGTGCAAGGTTTGGCCCTACACTGGAATCAAAAGAAAAACGTGCTAACCATACTAGAATTGCAATTGCTGATCCTCCTGATTGTTGTAGCCTACCTAAGAATAAGCTCACTGGCGAGATCATTTTGGTGCACCGAGGACAGTGTAGTTTCACAACCAAGGCAAATATAGCTGAACAGGCTGGTGCTTCAGCCATGCTGATTATAAATTACCGTACAGAACTTTTCAAGATGGTTTGTGAAGCAAATGAAACTGATGTGGATATTGGAATACCTACTGTCATGCTTCCACAAGATGCTGGGGAAAACTTGGAAAATCACATACTAAACAACTCAGTGGTGTCTGTGCAGTTGTACTCTCCATATCGTCCAATGGTTGATGTTGCAGAAGTGTTTTTATGGCTTATGGCTGTTGGTAGTATTCTCTGTGCTTCTTACTGGTCTGCCTGGACTGCGAGAGAGTCTGCCATTGAGCAGGAGAAGCTATTAAAGGATGCTTCAGATGAATATGTAAATGCAGAGAATGCTGGTTATAGTGCTTATGTGGAAATCAGTACTGCAGCAGCAATATCATTTGTTGTGATTGCTTCTTGTTTCTTGGTTATGCTTTACAAATTCATGGCATCATGGTTTGTTGAAGTTCTGGTGGTTCTATTTTGCATTGGTGGGGTTGAGGGACTACAAACATGCTTGGTGGCTCTGTTATCATGTTTCAGATGGTTCCAACATGCTGCACAAATATTTGTGAAAGTACCCTTCTTTGGTGCTGTATCATATCTGACAGTTGCTGTTACTCCCTTCTGCATAGTGTTTGCTGTGCTTTGGGGTGTCTATCGCCATGTATCATTTGCTTGGATTGGTCAAGATATTCTTGGTATCACATTGATTATTACAGTTCTTCAGATTGTGCGGATACCAAATCTCAAGGTTGGAACTGTTCTTCTCAGTTGTGCCTTCCTGTATGACATCTTCTGGGTGTTTGTCTCTAAATGGTGGTTCCATGAGAGTGTCATGATAGTGGTAGCTCGAGGTGATAAGAGTGGAGAAGATGGTATCCCCATGTTGCTCAAGATACCACGTTTGTTTGATCCTTGGGGTGGCTACAGCATCATTGGTTTTGGTGACATCATCTTACCAGGGCTTCTAGTTGCGTTTTCACTAAGGTATGATTGGTTAGCAAAGAAGAACCTTCGAGATGGATACTTCTTGTGGGCAATGACTGCTTATGGTTTAGGACTCCTTATCACATACATGGCTCTGAACTTGATGGATGGACATGGTCAACCTGCTTTGCTTTATATAGTCCCGTTTACACTTGGAACCTTTTTGTCATTAGGAAAGAAGAGAGGTGAACTCAAGGTACTATGGACAAGAGGGGAACCAAAAATACCTTGCCCTCACATCCAAGAGGATCAATCAACAAACCAGTAA 1620 0.4235 MGSLGASCALCCSLFMIFFTFSFAGDIVHHDNIAPKRPGCENNFVLVKVPTWIDGVESCEYVGVGARFGPTLESKEKRANHTRIAIADPPDCCSLPKNKLTGEIILVHRGQCSFTTKANIAEQAGASAMLIINYRTELFKMVCEANETDVDIGIPTVMLPQDAGENLENHILNNSVVSVQLYSPYRPMVDVAEVFLWLMAVGSILCASYWSAWTARESAIEQEKLLKDASDEYVNAENAGYSAYVEISTAAAISFVVIASCFLVMLYKFMASWFVEVLVVLFCIGGVEGLQTCLVALLSCFRWFQHAAQIFVKVPFFGAVSYLTVAVTPFCIVFAVLWGVYRHVSFAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKWWFHESVMIVVARGDKSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKNLRDGYFLWAMTAYGLGLLITYMALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKVLWTRGEPKIPCPHIQEDQSTNQ 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00612 539 PANTHER SIGNAL PEPTIDE PEPTIDASE 69 531 IPR007369 GO:0004190|GO:0016020
Vian2g00612 539 Pfam Signal peptide peptidase 244 523 IPR007369 GO:0004190|GO:0016020
Vian2g00612 539 SUPERFAMILY PA domain 90 139 IPR046450 -
Vian2g00612 539 FunFam Signal peptide peptidase-like 3 46 185 - -
Vian2g00612 539 SMART psh_8 243 512 IPR006639 GO:0004190|GO:0016020
Vian2g00612 539 Gene3D - 40 184 - -
Vian2g00612 539 Coils Coil 219 239 - -
Vian2g00612 539 Pfam PA domain 90 167 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00612 Vian-Chr2 7446749 7453266 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00612 K09597 - gmx:100808921 1045.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00612 2 7446749 7453266 Vian2g00612 2 7446749 7453266 ECH
Vian2g00612 2 7446749 7453266 Vian9g00663 9 8308295 8316401 PCT