Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00642 ATGATGGAATCTACTTATAGGATATGGTTACACGTAACAAAAGATGTGTCTAGCATGTGGAACTCTGATGAAGTGTGTAGATATCTACATATTGCAATTGGCACTGCCAAATGGCAGTTAGAGTTGACTGAAGCTCTGCCGCATCTCAAACTCAAACTCAAACTCTACACCCCCTTTCAAAATCACTCCTCCCTCTTTTTGTCTCCCTCCTCCTCTGCCATTCTTCTCTCCCCCGTATCCTCTACCACCGCCCTCCCTCTTGTGCCAACGTTCGTCCGTCCAGGTTCTAATCTTCTGATGTACACATTCTCAATCTTGCTCATAGCTACTTTGGGCAGCAACTCAAAGAAACATGAGGTAGCCCTATGGAAGCGTTCAGTGCTTATAAAAGGCCCTCTTGGCATTGTCTCTGGCACAGAGCTTGCATTCTTGCTCATGTTCATTGCACTCCTTGTCTGGACCTTTGCAACTTCTTTAAGCAACAGATGGGAAGAGAAGCTAGACGGTGCAGGATTGATGTTTGGTGTTGTTGGGAACATATGTTTGGTATTCATGTTTTTTCCTGTGGCTCGTGGTTCAAGCGTGCTGCCACTGCTTGGACTCACTTCTGAAAGTTGCATCAAGTACCATATTTGGCTTGGACATATTGCCATGCTACTATTCACTGCTCACGGTTTGAGCTTCATCATCCATTGGGCAATTATTCATCACTTGTCTGCGATGCTGGAATGGAAGAAAAACGATATATCAATTGTGGCTGGAGAGATATCTTTGCTTGCTGGTTTGTTACTGTGGATTGCAACCATTCCCCGCATTAGGCGAACTTATTTTGAGCTCTTCTATTACGCTCATCACCTCTACATCCTCTTCGTAGTCTTCTTCATCTTTCATGTTGGCATTTCCTTTGCCTTAATTATGCTCCCTGGTTTCTACCTCTTCATGGTTGATCGTTACTTGAGGTTTCTGCAATCAAGACGCCAAGTTCGTCTGGTTTCTGCTCGGGTTTTGCCATGTGAAGCTGTGGAACTCAACTTCTCCAAGGGCCATGAATTAACTTATAACCCCACAAGTGTGATGTTCATAAATGTACCAAACATATCCAAGCTGCAGTGGCATCCATTTACTGTTACTTCTAATAATAATTTGGAGGCAGACAAGCTAAGTGTTGTTATTAAAAGTGAAGGACCTTGGACCAATAAGCTATACCAGTTGCTTTCAACTCCTTCCACAATTGATCACGTTTCTGTGTCTGTCGAAGGTCCTTATGGACCTGCTTCTACCAACTATCTACGGCATGACACTCTTGTGATGGTGAGTGGAGGAAGTGGCATCACACCTTTTATATCCATCATTCGGGAGCTAATACATCTGAACACTATATTCAAATGCAAAACCCCAAAAGTCTTCCTAATTTGTGCCTTCAAGAACTCTTCTTCTCTGTCAATGCTAGAGTTGATCCTCCCAATAAATGGCACCCCTTCTGATATTTCTAATTTAGAATTACATATTGAGGCCTACATCACAAGGGACAAGGAGCCTAAAGCAGATGGCCCTATTCACCCTCAAATCAGATGGTTCAAGCCAAATCCATCTGATGAACCAGTACACGCTATATTAGGTCCAAACAGTTGGCTCTGGCTTGGTGCTATAATTTCATCCTCTTTCGTCGTTTTCCTTATCTTAATAGGGATCATTACCCGTTACTACATTTTCCCAATTGATCATAACTCAAATAAAATATTTTCCTACCCTTTGGATGCCTTCCTTAACATGCTAGTAATATGTGTGTCCATAGCAAGTGTTTCTAGTGCAGCTTTTCTTTGGAACAAGAAATATTATGCTAAAGAAGGAAAGAAGATTAAGAACATGGAAGGGTCTACACCAACAGTGTCGCCAAACTCCATGGTTTACAATGTAGATAGAGAACTGGAAAGTCTTCCATATCAGTCACTTATTCAAGCCACCAATGTGCATTATGGTGCAAGACCTGACCTAAAAAAGATCCTATTTGAGCACAAAGGGTCTAGTGTGGGAGTTCTTGCTTCAGGACCCAAAACAATGAGGCATGAGGTTGCAGCCATTTGCTCCTCATCTGGTTTAGCTGAGAATCTGCATTTTGAGTCTATTAGCTTTAGCTGTCCCACCTTCATATACTTTGTGAAGGTGTTCATCAATGGACAAAGAGTACATAAGGGTGAGGTAACATCGATCCATGGAGGTGATGCAAAGAGACTCTACATGGTTTGGATGGATTGTATTTGGAAACCTCAAATGAAGCGCAATAGCTTGCCTCCAATGGTTTCATGTTGGAAAAGCATGTTAAGTAATGTTGCAACGTGTTCACTGCAGTCTATGAGAAGCTCTATAAGCCATGGCAGTTTGGAAATGCAACTTGATAGATTGCAGTTACTTAAATCTATTGTTTTCAAAGAGGGTAATCTAAACCCAATAGAAATTTGTTCATTCAGAAACAGCATCCTAGAGCGGAGAGAAAATCCATTTACCGATTTTGATACTGGCCCTTTGCACCCAGCAAATGAGATATCTTTGAGGTTTTCATGA 2562 0.4192 MMESTYRIWLHVTKDVSSMWNSDEVCRYLHIAIGTAKWQLELTEALPHLKLKLKLYTPFQNHSSLFLSPSSSAILLSPVSSTTALPLVPTFVRPGSNLLMYTFSILLIATLGSNSKKHEVALWKRSVLIKGPLGIVSGTELAFLLMFIALLVWTFATSLSNRWEEKLDGAGLMFGVVGNICLVFMFFPVARGSSVLPLLGLTSESCIKYHIWLGHIAMLLFTAHGLSFIIHWAIIHHLSAMLEWKKNDISIVAGEISLLAGLLLWIATIPRIRRTYFELFYYAHHLYILFVVFFIFHVGISFALIMLPGFYLFMVDRYLRFLQSRRQVRLVSARVLPCEAVELNFSKGHELTYNPTSVMFINVPNISKLQWHPFTVTSNNNLEADKLSVVIKSEGPWTNKLYQLLSTPSTIDHVSVSVEGPYGPASTNYLRHDTLVMVSGGSGITPFISIIRELIHLNTIFKCKTPKVFLICAFKNSSSLSMLELILPINGTPSDISNLELHIEAYITRDKEPKADGPIHPQIRWFKPNPSDEPVHAILGPNSWLWLGAIISSSFVVFLILIGIITRYYIFPIDHNSNKIFSYPLDAFLNMLVICVSIASVSSAAFLWNKKYYAKEGKKIKNMEGSTPTVSPNSMVYNVDRELESLPYQSLIQATNVHYGARPDLKKILFEHKGSSVGVLASGPKTMRHEVAAICSSSGLAENLHFESISFSCPTFIYFVKVFINGQRVHKGEVTSIHGGDAKRLYMVWMDCIWKPQMKRNSLPPMVSCWKSMLSNVATCSLQSMRSSISHGSLEMQLDRLQLLKSIVFKEGNLNPIEICSFRNSILERRENPFTDFDTGPLHPANEISLRFS 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00642 853 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 323 428 IPR017927 GO:0016491
Vian9g00642 853 Pfam FAD-binding domain 327 426 IPR013112 GO:0016491
Vian9g00642 853 SFLD Ferric reductase subgroup (FRE) 116 711 - -
Vian9g00642 853 Pfam Ferric reductase NAD binding domain 432 696 IPR013121 GO:0016491
Vian9g00642 853 SUPERFAMILY Riboflavin synthase domain-like 326 424 IPR017938 -
Vian9g00642 853 Pfam Ferric reductase like transmembrane component 174 294 IPR013130 -
Vian9g00642 853 CDD NOX_Duox_like_FAD_NADP 330 509 - -
Vian9g00642 853 Gene3D - 416 536 IPR039261 -
Vian9g00642 853 FunFam Ferric reduction oxidase 3 421 538 - -
Vian9g00642 853 SFLD Ferric Reductase Domain 96 712 - -
Vian9g00642 853 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 416 488 IPR039261 -
Vian9g00642 853 PANTHER NADPH OXIDASE 97 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00642 Vian-Chr9 7832663 7847943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00642 91 712 Miscellaneous Gene Families AT1G01580 55.690 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00642 K00521 - gmx:100790114 1019.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00586 2 7161056 7165725 Vian9g00642 9 7832663 7847943 PCT