Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00586 ATGAAGTTGTTTCAGGCACGAGCCTACGAAGGTGCAAATCTTCTGGTTTACACTTCTCCAATCTTGTTCATAGCTGCTTTGGGATGTGTCTACGTTCACATAGCCAACAAAGGAAAGGATTCCGACATGAAAAAAAGAAAGAAACACGAGGTATCCATATGGAAGCGTTTGGTTCTTGTGAGAGGCCCTCTTGGCATAGTTTCTGCCACAGAACTGGCCTTCTTGTCTATGTTCATAGTTCTCCTCTTATGGTCCTTTTCAATCTATCTGCACAATGGCTTTGCCAAAATCACCCACAAATCAGCAGCAGAACAAGGTGTAAAAGTCTGGGAGAAGAGACTAGCTAGTGCAGCTGTGAAATTGGGTTTGGTTGGGAACATATGTTTGGCATTCTTGTTTTTCCCAGTTGTTCGTAGTTCCTCAGTGCTACCACTGGTTGGACTAACACCAGAGAGTTGCATCAAATACCATATTTGGCTAGGACATATTGCCATGACCCTTTTCACAGCTCATGCTATGAAGCAGATGTTGGAATGGAAAACAAAAGGGATTTCAAATGTGGGGGGAGAGGTATCTTTGGTTGCTGGTTTGTTGATGTGGATTGCAACAATCCCTCGTATTAGGCGTAAAGCTTTTGAAGTCTTCTTCTACACTCACTACCTCTACATCCTCTTCATTCTCTTCTTCATCTTTCACGTTGGTTTCTCCTATGCATGCACCATGCTCCCAGCTTTCTACCTCTTCTTAGTTGATCGCTACCTAAGGTTTCTGCAATCAAGATACCAAGTTCCTTTGATTTCTGCTCGTCTTTTGCCTTGTCAAACTCTACAACTCAACTTCTCCAAGAGCCATGGTTTAACTTATAGCCCCTCAAGTATTATGTTCATAAATATACCAAGCATATCCAAGCTACAATGGCATCCATTTACCATTACTTCTAATAGTAATTTGGAGCCAGAAGTGTTGAGTGTTGTCATCAAAGGTGAAGGAACTTGGTCCCAGAAGCTCTACCATCTGCTTTCAACCCCTTCAGCAATTGATCATCTCAGTGTCTCTGTTGAAGGTCCATATGGACCTGCATCAACCAATTATCTAAGGTATGATTATGACACTCTTGTGATGGTTAGTGGAGGGAGTGGAATCACTCCCTTTATCTCCATCATTCGGGAGCTACTGTATTTGAGCACAGCATTCAGATGCAGAACCCCAAAAGTTGTCCTAATCTGTGCATTCAAGAACTCTTCCTCTCTATCAATGCTGGATCTAATCCTTCCAAATTCTGGCACCCCTTTTGATATTTCTAACATGCAACTACAAATTGAGGCCTACATCACAAGAGAGGAGGAGCATGTATTGGAAACTCAAAGCCACGTTCAAGATATAAGGTTCAAGCCCAAGGCAACAGATGCACCCATATCTGCTATTTTAGGTCCTAACAGTTGGCTTTGGCTGTGTGCTATAATCTCATCCTCGTTCATTATTTTCCTTGTCCTAATTGGGATCATTACACGATACATCATTTTCCCCGTAGACTACAATTCTAATAAAATATTTTCACAATCTTTGGGATCGTTCCTCAGCATGCTAGCAATATGTGTGTCCATAACAATGACTGCTAGTGTAGCTTTTCTTTGGAACAAGAAACACAACGATGTAGAAGCAAAGCAGATTCAGAACTTAGAAGGGTCAGCATCCGCAGATAAAGAAGTGGAAAGCCTACCCCACCAATCCCTTGTTCAAGCTACAAAAGTGCATTTTGGTGTAAGACCTGATCTCAGAAGAATGCTAATGGAAGTTGAAGGAACAAGAGTTGGAGTTTTTGTTTCGGGACCAAAGAAGATGAAGCAGGAGGTTGCAGCCATTTGCTCATCTGGTTTAGCAGAAAATCTTCATTTTAAGTCTTATAGCTTTAGCTGGTAA 1920 0.4177 MKLFQARAYEGANLLVYTSPILFIAALGCVYVHIANKGKDSDMKKRKKHEVSIWKRLVLVRGPLGIVSATELAFLSMFIVLLLWSFSIYLHNGFAKITHKSAAEQGVKVWEKRLASAAVKLGLVGNICLAFLFFPVVRSSSVLPLVGLTPESCIKYHIWLGHIAMTLFTAHAMKQMLEWKTKGISNVGGEVSLVAGLLMWIATIPRIRRKAFEVFFYTHYLYILFILFFIFHVGFSYACTMLPAFYLFLVDRYLRFLQSRYQVPLISARLLPCQTLQLNFSKSHGLTYSPSSIMFINIPSISKLQWHPFTITSNSNLEPEVLSVVIKGEGTWSQKLYHLLSTPSAIDHLSVSVEGPYGPASTNYLRYDYDTLVMVSGGSGITPFISIIRELLYLSTAFRCRTPKVVLICAFKNSSSLSMLDLILPNSGTPFDISNMQLQIEAYITREEEHVLETQSHVQDIRFKPKATDAPISAILGPNSWLWLCAIISSSFIIFLVLIGIITRYIIFPVDYNSNKIFSQSLGSFLSMLAICVSITMTASVAFLWNKKHNDVEAKQIQNLEGSASADKEVESLPHQSLVQATKVHFGVRPDLRRMLMEVEGTRVGVFVSGPKKMKQEVAAICSSGLAENLHFKSYSFSW 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00586 639 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 258 363 IPR017927 GO:0016491
Vian2g00586 639 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Vian2g00586 639 SFLD Ferric Reductase Domain 18 639 - -
Vian2g00586 639 CDD NOX_Duox_like_FAD_NADP 265 446 - -
Vian2g00586 639 Gene3D - 512 639 IPR039261 -
Vian2g00586 639 Gene3D - 351 477 IPR039261 -
Vian2g00586 639 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 351 463 IPR039261 -
Vian2g00586 639 PANTHER NADPH OXIDASE 14 637 - -
Vian2g00586 639 FunFam Ferric reduction oxidase 3 356 475 - -
Vian2g00586 639 Pfam FAD-binding domain 262 361 IPR013112 GO:0016491
Vian2g00586 639 Pfam Ferric reductase NAD binding domain 369 623 IPR013121 GO:0016491
Vian2g00586 639 SUPERFAMILY Riboflavin synthase domain-like 261 359 IPR017938 -
Vian2g00586 639 Pfam Ferric reductase like transmembrane component 121 229 IPR013130 -
Vian2g00586 639 SFLD Ferric reductase subgroup (FRE) 30 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00586 Vian-Chr2 7161056 7165725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00586 11 639 Miscellaneous Gene Families AT1G01580 55.775 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00586 K00521 - gmx:100814642 961.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00586 2 7161056 7165725 Vian2g00586 2 7161056 7165725 ECH
Vian2g00586 2 7161056 7165725 Vian9g00642 9 7832663 7847943 PCT