Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00638 ATGTCCACCACGAAGAACCATTTCAAAGACCCTGAACATTTATACTCTCCATGGAGCTTCTCAAAGCTCACGGCTTTCTTCTTCCTCTTAATCTCCATCTCCTACCTCTTCTACTCCCTCAGATTCGTCAGCCACTCCTATGACTGTGATCAACCACCCCACATTCCCACCGTCACTCACCATCACACATCCAACCCCCCACCCGAAGAAAAGCCTCCACCTTTTGAAGAAACCAACCTTTCCCACATAGTCTTTGGCATAGGGGCCTCGGCCAAGCTCTGGAAGCAGCGAAAAGAGTACATCAAGATGTGGTGGAGGCCCAATGAGATGCGTGGAGTTGTGTGGTTGGAGCAGAGGGTGAAGACTGAACCCGGTGATGAAAATTCCTTACCCTTGTTGAGGATCTCCGGTGACACTTCAAGGTTCAAGTATAAGAATCCAAAGGGGCATAGATCGGCGATTAGAATCTCACGCATAGTGTCTGAGACTCTGAGGCTTGGGATGACAGATGTGAGGTGGTTCGTGATGGGGGACGATGACACCGTTTTTGTGGCAGAAAATTTGGTGAAGGTTTTGCAGAAGTATGACCATAACCAGTTCTATTACATTGGGAGTTCTTCAGAGAGTCATTTGCAGAATATATACTTTTCTTACAATATGGCTTATGGGGGTGGTGGTTTTGCCATCAGTTATCCTTTGGCTGTGGCATTGGAGAAAATGCAAGATAGGTGCATTCAGAGGTACCCTGGTCTGTATGGTTCTGATGACAGAATTCAAGCTTGTATGGCAGAATTAGGAGTTCCTCTCACCAAGGAGAAAGGCTTCCATCAGCCCGCACGTGACTTGTGGGTATTTCGATGTGTACGGCAATCTCTTTGGGCTTCTGGCGGCCCATCCACTTACACCGCTGGTGTCTATACATCACTTGGACGTGGCAGAGCCCATATTTCCAAACGTGAGCCGGGTGCGGGCTCTGAAGCGGCTGAACGGGCCCATGAAGCTGGACCCAGCCGGGCTCATGCAGCAATCTATTTGCTACGACAAGGGCCGGACCTGGACCGTATCCGTTTCGTGGGGATACGCGAGGCAGTGTATGACAGTGCTGCCAATGAAACTTCAACTCATTACATTCGGGTTCAGGAAAACCCCGATTGCAAGTGGAAAATGGAGGATCCCACCCGGATCAAATCGGTCGAAGTTCGTAAGAAAATCGACCCGCATTTGTGGGATAAGGCTCCAAGAAGAAATTGTTGTAGGGTTCGACGCACGAAGAAGAAAGAAACTATGGTGATTGATGTTGGGGAATGCAGGGGAGATGAAGTTGTTGAATTGTAG 1335 0.4891 MSTTKNHFKDPEHLYSPWSFSKLTAFFFLLISISYLFYSLRFVSHSYDCDQPPHIPTVTHHHTSNPPPEEKPPPFEETNLSHIVFGIGASAKLWKQRKEYIKMWWRPNEMRGVVWLEQRVKTEPGDENSLPLLRISGDTSRFKYKNPKGHRSAIRISRIVSETLRLGMTDVRWFVMGDDDTVFVAENLVKVLQKYDHNQFYYIGSSSESHLQNIYFSYNMAYGGGGFAISYPLAVALEKMQDRCIQRYPGLYGSDDRIQACMAELGVPLTKEKGFHQPARDLWVFRCVRQSLWASGGPSTYTAGVYTSLGRGRAHISKREPGAGSEAAERAHEAGPSRAHAAIYLLRQGPDLDRIRFVGIREAVYDSAANETSTHYIRVQENPDCKWKMEDPTRIKSVEVRKKIDPHLWDKAPRRNCCRVRRTKKKETMVIDVGECRGDEVVEL 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00638 444 PANTHER FRINGE-RELATED 22 277 - -
Vian9g00638 444 Gene3D - 70 290 - -
Vian9g00638 444 FunFam Fringe-related protein-like 70 283 - -
Vian9g00638 444 MobiDBLite consensus disorder prediction 55 75 - -
Vian9g00638 444 Pfam Protein of unknown function, DUF604 212 277 IPR006740 -
Vian9g00638 444 Pfam Protein of unknown function, DUF604 364 418 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00638 Vian-Chr9 7803875 7806707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00638 22 285 Glycosyltransferase AT4G11350 61.290 3.77e-118 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00638 - - gmx:100789583 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00638 9 7803875 7806707 Vian9g00638 9 7803875 7806707 ECH
Vian2g00584 2 7139811 7142162 Vian9g00638 9 7803875 7806707 PCT