Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00584 ATGTCCACCATGAAAAGAAACCTCAAGGATCAAGAACACTACCTCCACTCTTCATGGACCATAGCAAAACTAATCACCTCCTTCTTCCTCTTGGTTTCCATCTCCTACCTCTTTTACTCCCTCGGATTCATCACTCATTCACACGATTGTCCTCCAAAAAAGCCTTACCCTCTTTCCACAACCACACACGTTTCCAACAGCACCACCGCTCCTCCACAACCTCAGCACACAGCAAAACCCTCTGAGAAAACCAACATTTCACACATAGTGTTTGGCATAGCAGCGTCTTCCAGGCTCTGGAGGCAAAGAAAAGAGTACATAAAGCTATGGTGGAGGCCAAACGAGACAAGGGGAATAGTGTGGCTAGACCAAGAAGTGAAAAGTGAACCTGGTGATGAGACCCTCTTACCAACATTGAGAATATCGAGTGATGTCTCAAAGTTCAAGGTGAAGAATCCACGTGAGGAGCTGGGGGTTCGTATATCTCGAATTGTGTCGGAGACAGTGAGGCTTGGGATGGAGAATGTGAGGTGGTTCGTGATGGGAGATGATGACACTTTCTTTGTGACTGAGAATTTGGTGAAGGTGTTGCAGAAGTATGATCACAAGCAGTTCTATTACATAGGGGCCAATTCAGAGAGCCACTTGCAGAACATTCACTTTTCCTATAACATGGCTTATGGGGGTGGAGGTTTTGCCATAAGTTACCCTTTGGCTGTGGCATTGGAGAGAATGCAGGACCAGTGCCTCCAGAGATACCCTGCATTGTTCGGCTCAGATGATAGGATCCAGGCTTGTATGGCAGAGCTTGGTGTCCCTCTCACCAAGGAAATTGGCTTTCACCAGTTTGATGTATATGGCAGCGTGTTTGGGCTCTTAGCAGCACATCCCGTTATACCTTTAGTTTCGATGCATCACTTGGACGTGGTTGAGCCCATATTCCCGAACGTGAACCGTGTGGAGGCCCTACAGAAGCTTATTGGGCCCATGAGACTGGACTCGTATGGGCTCATGCAGCAATCCATATGCTACGACAGAGCCCGGCACTGGACCGTTTCCGTTTCATGGGGTTATGCGGTTCAAATATTCCGGGGCATTTTCTTGGCCCGGGACATGGAGATGCCTGGCAGAACCTTTCTGAATTGGATCCGGCGGGCGGATTATACCGGATTTCCATTCAACACGCGCCCTTTCAGCCGGAATGCTTGCCTGAAACCTTTTGTTTTCTACTTGGATAATGCCATCTACGATGGGGTTGCTGATGAGACTGTCAGTGACTATGTTCGGGTCCAGCCCAACCCGGATTGCAGGTGGAAAATGCCAGATCCGACCCAAATCTCAATGATTAGGGTTTATAAGAAACTCGATTCGCATTTGTGGGACAAGCAGTCTCCGAGGAGAAATTGTTGCAGGTTTCGACCAACAGAGGAGGAAGGAAGTATGGTGATTGAAGTGGGAGAATGCAGAAAAGATGAATTTGCTAATTAA 1488 0.4792 MSTMKRNLKDQEHYLHSSWTIAKLITSFFLLVSISYLFYSLGFITHSHDCPPKKPYPLSTTTHVSNSTTAPPQPQHTAKPSEKTNISHIVFGIAASSRLWRQRKEYIKLWWRPNETRGIVWLDQEVKSEPGDETLLPTLRISSDVSKFKVKNPREELGVRISRIVSETVRLGMENVRWFVMGDDDTFFVTENLVKVLQKYDHKQFYYIGANSESHLQNIHFSYNMAYGGGGFAISYPLAVALERMQDQCLQRYPALFGSDDRIQACMAELGVPLTKEIGFHQFDVYGSVFGLLAAHPVIPLVSMHHLDVVEPIFPNVNRVEALQKLIGPMRLDSYGLMQQSICYDRARHWTVSVSWGYAVQIFRGIFLARDMEMPGRTFLNWIRRADYTGFPFNTRPFSRNACLKPFVFYLDNAIYDGVADETVSDYVRVQPNPDCRWKMPDPTQISMIRVYKKLDSHLWDKQSPRRNCCRFRPTEEEGSMVIEVGECRKDEFAN 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00584 495 Gene3D - 76 308 - -
Vian2g00584 495 MobiDBLite consensus disorder prediction 58 82 - -
Vian2g00584 495 PANTHER FRINGE-RELATED 19 492 - -
Vian2g00584 495 FunFam Fringe-related protein-like 76 331 - -
Vian2g00584 495 Pfam Protein of unknown function, DUF604 217 470 IPR006740 -
Vian2g00584 495 MobiDBLite consensus disorder prediction 55 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00584 Vian-Chr2 7139811 7142162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00584 21 490 Glycosyltransferase AT5G41460 57.895 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00584 - - gmx:100777888 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00584 2 7139811 7142162 Vian9g00638 9 7803875 7806707 PCT