Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00561 ATGTTGGAGAAAGTGGAAGAGTTTAACATGGAGAGAGTGATAGAGGAATTTGAGAGGGTGACAAAGGATGCTGGGAGGATTCAAAAGGAAACACTGAAAAAGATTCTGGAAGATAACGCTTCTGCTGAGTACTTACTGAATTTGGGTCTGAATGGAAGGACTGACCCTGAGAGTTTCAAGGCCTTTGTTCCACTGGTCACTCACAAGGACTTGGAGCCTTATATCAATAGAATACTCGATGGGGATACCTCTTCTGTTCTCACTGGCAAACCCATCACAACCATGTCTTTGAGTTCTGGCACTACTCAGGGAAAGCCAAAGTTTGTACCATGGAATGATGAACTGTTTGACACCACATTGCAGATATATCACACCTCTTTTGCCTTCAGAAACAGGGAATTTCCCATGAACAATGGCAAAGCCTTGGGCTTTGTCTACAGCAGCAAGCAGTTCAAGACCGAAGGGGGTGTGCTAGCAGGAACCGCCACAACCAATGTGTTTCGCAGTCCAGGGTTCAGGACTGCAATGAAGTCCATTCAGTCCCCATTTTGCAGCCCTGAAGAAGTTATATTTGGTCCTGATTTTCACCAATCACTGTACTGCCACCTCTTGTGTGGGCTAATATTCAGGGAGGAAGTTCATATGGTGTCCTCCACCTTTGCATACAGCATTGTGAGTGCTTTTAGGACCTTTGAGCAAGTGTGGGAGGAGCTTTGTGTTGACATCAAACAAGGGGTGCTGAACAGCAAGGTCACAGTCCCATCTGTTAGGACAGCAATGTCTAAGCTGCTGAAACCTGACCCTGAGCTGGCCAACTTGATCCACAATAAGTGCATGGGACTGAGCAACTGGTATGGCCTAATACCAGAGCTTTTCCCCAATGTTAAGTATGTTTATGGCATCATGACTGGGTCAATGGAACCTTATTTGAGGAAGTTGAGGCATTATGCTGGAGAGTTGCCTTTGTTGACTTCTGACTATGGATCTTCTGAAGGGTGGATAGCAACCAATGTGAAACCAAGAGTGCCACCTGAATTGGCCACATACACTGTTCTTCCTCAAATTGGCTACTTTGAATTCATCCCTCTGAGAGAGCTGGCAGAAACTAATGGAGATAGCAGTTTCCTTTGTATGGATCCTAAGCCTGTGGGGCTCACTGATGTGAAGGTTGGCGAGGAGTACGAGATAGTCATCACCAATCCAGCAGGCTTGTACAGGTACCGACTTGGAGATGTGGTGAAGGTTATGGGGTTCCATAACTCAGCTCCAGAAGTGAAGTTTGTTAGGCGCAGCAATCTTCTGCTTAACATCAACATTGACAAGAACACAGAGAAAGATTTGCAGATAGCTGTGGAATCAGCATCGCAGTTGTTGGCAGAGGAGAAATTAGAAGTTATAGATTACACAAGCCACATAGATTTGTCCAAAGAGCCAGGACATTATGTGATATTCTGGGAAATCAGTGGAGAAGCAAGTGAAGAAGTGCTTGGTGGATGCTGCAACTGCATGGACAAGGCTTTTGTTGATGCTGGCTACACCAGTTCTCGCAAAGTCAACTGCATTGGTGCCCTTGAACTCCGACTTGTGAGGAGAGGAACATTCCAGAAGATTCTTGAGCATTACGTGGCACTTGGATCTGCTGCAAATCAGTTCAAGACACCAAGATACGTAGGCCCTACAAACACCAGAGTGTTGCAAATATTGAATGAAAATGTTGTCAAGAGCTATCTCAGTACTGCATTCAACTGA 1749 0.454 MLEKVEEFNMERVIEEFERVTKDAGRIQKETLKKILEDNASAEYLLNLGLNGRTDPESFKAFVPLVTHKDLEPYINRILDGDTSSVLTGKPITTMSLSSGTTQGKPKFVPWNDELFDTTLQIYHTSFAFRNREFPMNNGKALGFVYSSKQFKTEGGVLAGTATTNVFRSPGFRTAMKSIQSPFCSPEEVIFGPDFHQSLYCHLLCGLIFREEVHMVSSTFAYSIVSAFRTFEQVWEELCVDIKQGVLNSKVTVPSVRTAMSKLLKPDPELANLIHNKCMGLSNWYGLIPELFPNVKYVYGIMTGSMEPYLRKLRHYAGELPLLTSDYGSSEGWIATNVKPRVPPELATYTVLPQIGYFEFIPLRELAETNGDSSFLCMDPKPVGLTDVKVGEEYEIVITNPAGLYRYRLGDVVKVMGFHNSAPEVKFVRRSNLLLNINIDKNTEKDLQIAVESASQLLAEEKLEVIDYTSHIDLSKEPGHYVIFWEISGEASEEVLGGCCNCMDKAFVDAGYTSSRKVNCIGALELRLVRRGTFQKILEHYVALGSAANQFKTPRYVGPTNTRVLQILNENVVKSYLSTAFN 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00561 582 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 581 IPR004993 -
Vian9g00561 582 Pfam GH3 auxin-responsive promoter 16 557 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00561 Vian-Chr9 6439640 6442596 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00561 17 579 EF-hand Containing Proteins AT1G23160 38.235 7.21e-133 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00561 K14506 - gmx:100813492 1088.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00561 9 6439640 6442596 Vian9g00561 9 6439640 6442596 ECH
Vian6g01040 6 27666942 27670062 Vian9g00561 9 6439640 6442596 PCT