Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00549 ATGTCTTATTCTGCAGTTTCTATTCCAACCTCTATATCTTCCTCTGCAACAATGGACATCACAACAGAGAATAAACTGTTTCTCCACTCACTCTTCTCCAACAAAGGCTTATGCAACCATTCACCAATCACGAGGTCTCACTCTAGCAATCTTCTATGTTGCTCCTCTAACAGCTTCAGAGCAACATCAATGCAACCAAAGCATAAAAGCATGCACTCCATAGTAGTTTTTCCACTTCAACTTTCAGTGTCCATTCTTCCAAATCAACTTCGCTCCTTCTTCTTTGACCCAGAAAAGAAGAGGGAAATGATGATGGGGCAGAAGGGTATCAATTTTAAGGAAAACACGGTGGAAAGCAGCGAAGAAGAGACGATAAATAGAGCCAACTGGGTAGAAAAATTAAGGGGAATTAAGACTTATTGGAGAGGCAAACGGCCTAAAGAGAGCATGGATTCAGATGTAGTATCTAAACACGATAATGAGTGTGATTGTGATGCAGAGGATAGTGTTTGTGTGGCAGGTTATGAAGAAGGAAATGGAAAAGAGGAAGATGGACAAGAAGTGACATTTGATCGAGACTCTTTCTCAAAATTTCTGGTCCCAGTTCCTTGGTCTGATACCAAACTATTCTCGAAGCTGGCTTTCCTGTGCCACATGGCTTATATCATACCACAAATCAAGGCTAAGGACTTGGGGAGATACTATGGTCTTCAATTCGTTACATCATCTTTGAAAAAGAAAAAGAAAAAGAAAGGAGATGTGACAGAGATTAAAGCAAAACTTGACGAGGACTCTATTTGTGTGCCTATGGATGCCTCAGAAGCCTCTCAAAATGGCTCAGAGAAGGGTGATGATAATGAACAGAAGCATCAAATGAAGCTTGCATATGATATTACTGCTTCAGCTGCCTCTTATGTCCAATCACGTGCCAAGGACCTATTGTCTCTTGCTTCTAAGTCAAAGGAACATAGTGGTGATGAAGACTTCAATGGAAGAGAAGACTCACCTCAAGAGGAGGCTGATGAAACTCCACAGGTGGACAAGTCCAAGTCTGGAGTTAATGTTTCAGAATTAACAATGACTGTGGTGGCTGCAGCAGGATCAGCAATGGACCTTCAGTTACTTCGTTCTTCGTCTTGTGAATGGTTTGTTTGTGATGATCCCAACACGCACACTCGATGCTTTGCCATTCAGGGATCATATTCTGTGGCATCTTGGCAAGCAAACCTCTCATTTGAGCCTACCACATTTGAGGACACGGATGTTCTTGTTCACAGTGGAATATATGAAGCTGCCAAGGGAATATATGAGCAATTCATGCCAGAAATAATGGATCATTTGCAGAGACATGGAGATAGTGCAAAGATTCAATTGGCTGGACATTCCCTAGGAGGCAGTCTCTCAGTTTTGGTGTCTTTGATGCTATTGACTAGGAAGGTTGTCAGTTCCTCAACTCTTCTTCAAGTAGTGACTTTTGGTTCTCCATTTGTGTTATGTGGAGGCCAAAAATTACTCAATGACCTTGGCCTGGATGATAGCTTCATTCACTGTGTAATGATGCACAGAGATATTGTTCCTAGGATCTTCTCATGCAGTTTCCCTAGCCATGTTATAACTGTCCTTAAGCGCTTAAAAGGCTCATTTGATTCACATCCTTGTCTCATAGAAAAGAAGGTCTTGTACTCACCATTGGGTAAAATGTTAATTCTCCAACCAGATGAGAAAACATCTCCTTCACATCCCTTACTGCCATCAGGAAGTGGTTTCTATGTTCTTGACAGTAGCAGATGTGGATACTCTCCAATTGTTCTAAGAACATTTCTCAATCAACCACACCCCATTGAAACACTAAGCAATCCAAAAGCTTATGGCTCAGATGGCACAGTTTTAAGAGACCATGATTGTAACAACTATCTTATGGCAGTGAATGGAGTTTTAGCACAAAATTCAAAGATTGTTGTCAGGACAAGGAGATCAAGGCAGCAACGAAAAATATTGAAGAGAAAGATGAGAAAATAA 2019 0.4111 MSYSAVSIPTSISSSATMDITTENKLFLHSLFSNKGLCNHSPITRSHSSNLLCCSSNSFRATSMQPKHKSMHSIVVFPLQLSVSILPNQLRSFFFDPEKKREMMMGQKGINFKENTVESSEEETINRANWVEKLRGIKTYWRGKRPKESMDSDVVSKHDNECDCDAEDSVCVAGYEEGNGKEEDGQEVTFDRDSFSKFLVPVPWSDTKLFSKLAFLCHMAYIIPQIKAKDLGRYYGLQFVTSSLKKKKKKKGDVTEIKAKLDEDSICVPMDASEASQNGSEKGDDNEQKHQMKLAYDITASAASYVQSRAKDLLSLASKSKEHSGDEDFNGREDSPQEEADETPQVDKSKSGVNVSELTMTVVAAAGSAMDLQLLRSSSCEWFVCDDPNTHTRCFAIQGSYSVASWQANLSFEPTTFEDTDVLVHSGIYEAAKGIYEQFMPEIMDHLQRHGDSAKIQLAGHSLGGSLSVLVSLMLLTRKVVSSSTLLQVVTFGSPFVLCGGQKLLNDLGLDDSFIHCVMMHRDIVPRIFSCSFPSHVITVLKRLKGSFDSHPCLIEKKVLYSPLGKMLILQPDEKTSPSHPLLPSGSGFYVLDSSRCGYSPIVLRTFLNQPHPIETLSNPKAYGSDGTVLRDHDCNNYLMAVNGVLAQNSKIVVRTRRSRQQRKILKRKMRK 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00549 672 MobiDBLite consensus disorder prediction 268 289 - -
Vian9g00549 672 Pfam Lipase (class 3) 395 531 IPR002921 GO:0006629
Vian9g00549 672 SUPERFAMILY alpha/beta-Hydrolases 378 531 IPR029058 -
Vian9g00549 672 Gene3D alpha/beta hydrolase 340 554 IPR029058 -
Vian9g00549 672 MobiDBLite consensus disorder prediction 319 346 - -
Vian9g00549 672 MobiDBLite consensus disorder prediction 319 352 - -
Vian9g00549 672 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 19 666 IPR043367 GO:0008970
Vian9g00549 672 CDD Lipase_3 346 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00549 Vian-Chr9 6292469 6295706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00549 10 664 Acyl Lipid Metabolism Gene Families AT3G61680 47.833 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00549 - - vra:106773723 1261.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00549 9 6292469 6295706 Vian9g00549 9 6292469 6295706 ECH
Vian6g01052 6 27852206 27856641 Vian9g00549 9 6292469 6295706 PCT