Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01052 ATGCAATGCAACAAACACTTGAACCGGATTGATAAGCTTTTCATATCAAGACAAAATACAGTGAAGGATTTGGCTATCCAACGCATAGCAATTACAACCATGGCATACACTGCAGTTGCTATGCCTACCTCTCCAGCTGCTACCACTGCAACCATGGACATTGCAAAAGAACATAATGGTCTTCGTCGTTCCCAATCCAGCAAAGAACTACGCACGAGTTCCATTATGCAGAGGTCTTATTCTGACAACCACCTATGTTGCTCCATCAATCGCATACACGCCACATCAGTTACACCAAAACTTAAGAGCAATCTGTCAACGGGAATTTCCCCATTTCCATTTTCAGGCTCCATTCTTCCAAATTCGCTGCGTTCCTTCCTGTTTGATCCAGAAACAAACAGGGATATAGTTGTGAGGGAGAAGGAGATAAGTATTGAGGAAAACATGGTGGAAAGCAGCAAAGAAGAACGAGTAAATAGAGCCAACTGGGTGGAGAGGCTTATGGAAATCAAGAAACATTGGCGAAATAGACTGCCAAAAGAAAGCATGGATCCAAATGTGATATGCAAGGACAATAATTACGAGGAATGCGAATGTAATGGAGATGACGGTGTTTGTGTGGTGGGTGAAGATGAAGATGAGGAGGAAGTGACATATGATCGTGACTCATTCTCAGAATTTCTGGTTGAAGTGCCATGGTCTGATACCCAACTGTACTCTCAACTTGCTTTCCTGTGCAACATGGCCTACGTAATACCTCAAATCAAGGCTAAGGACTTGCGACGATACTACAACCTTCAATTTATAACATCTTCTTTGGAGAAGAAGGCCCAAGTGGCTAAGTTAAAAATGAAACTTGACCAGGACTCAACTCGCGTTCCTATAGACGACTCTGTAGTCTCTAAAGGTAACACAAAGAAAGGCAAAGAAAATGCACAGAAGCCTCAAATCCAACTTGCTTATGATATCGCTACCTCAGCTGCCTCTTATGTTCAATTACGAGCTAAGGACCTCTTGTACCTTGCTGCTAAGTCACAAAAGAGTGAAAATGAAGAGTCTAACCTAGGAGGAGAGTCACCTCGAGAAGAGTTGGAAGGCACTTCGCGAGGCTACAAATCAGAGGTTGCTGCTTATGTAGCAGCATCCACAATGACAGCAGTGGTTGCAGCAGGGGAGAAGGAAAAACAAGAAGCGGCAAATGAACTCCAGTCACTTCATTCCTCACCTTGTGAATGGTTTGTTTGTGATGATCCCAGCAATCATACTCGATGCTTTGTGATTCAGGGGTCAGACTCCCTGGCATCTTGGCAAGCAAACCTCTTTTTTGAGCCCACAAAATTTGAGGGCACAGATGTACTTGTTCACAGAGGAATTTATGAAGCAGCAAAAGGAATATACGAGCAATTCATGCCCGCAATAATGGATCATTTGAAGAGACACGGGGATCGTGCAAAGCTTCAATTCACCGGGCACTCTCTCGGGGGCAGTCTCTCTCTTTTGGTTCATCTGATGCTGTTGACAAACAAGGTTGTGAGTCCCTCCACTCTTCGACCAGTTGTGACTTTTGGCTCACCATTTGTATTCTGTGGAGGCCATCAAATTATCCATGAGCTAGGCCTAGACGAGAGCCACATCCACTGTGTGATGATGCATAGAGATATTGTTCCCAGGGCTTTCTCCTGCAATTACCCAAATCATGTAGCTGTAGTTCTTAAGCGCTTGAACAGCTCGTTTCGCTCACATCCTTGTCTGCTGAAAAACAAGCTGTTGTATTCACCACTGGGTAAAATATTCATCCTCCAACCAGATGAGAAGACGTCTCCTCCACATCCTTTGCTCCCTCGAGGAAGTGCCTTCTATGCCCTGGACAATACTAAACCTGGATACTCTCCGAGTGTTCTTAGAACTTTCCTGAATCAACCGCACCCTATTGACACTCTGAGTGATCCAACAGCGTATGGTTCAGAAGGTACAATTTTGAGAGACCACGATTCCAGTAACTACCTTAAAGCAGTCAATGGAGTCTTGAGGGAACATTCTAAGATTCTCCTTCGCAGAGTGAGGAGCCAAAGGATTAATCAGTTGTGGCCACTTTTGACATCGCCGTCTCCACACTCATGGAGTCATGAACAGAACTTGGAGAGATGCAGCTTGATGACAAAGGAGATAGTGACGGGGGTTTGA 2184 0.446 MQCNKHLNRIDKLFISRQNTVKDLAIQRIAITTMAYTAVAMPTSPAATTATMDIAKEHNGLRRSQSSKELRTSSIMQRSYSDNHLCCSINRIHATSVTPKLKSNLSTGISPFPFSGSILPNSLRSFLFDPETNRDIVVREKEISIEENMVESSKEERVNRANWVERLMEIKKHWRNRLPKESMDPNVICKDNNYEECECNGDDGVCVVGEDEDEEEVTYDRDSFSEFLVEVPWSDTQLYSQLAFLCNMAYVIPQIKAKDLRRYYNLQFITSSLEKKAQVAKLKMKLDQDSTRVPIDDSVVSKGNTKKGKENAQKPQIQLAYDIATSAASYVQLRAKDLLYLAAKSQKSENEESNLGGESPREELEGTSRGYKSEVAAYVAASTMTAVVAAGEKEKQEAANELQSLHSSPCEWFVCDDPSNHTRCFVIQGSDSLASWQANLFFEPTKFEGTDVLVHRGIYEAAKGIYEQFMPAIMDHLKRHGDRAKLQFTGHSLGGSLSLLVHLMLLTNKVVSPSTLRPVVTFGSPFVFCGGHQIIHELGLDESHIHCVMMHRDIVPRAFSCNYPNHVAVVLKRLNSSFRSHPCLLKNKLLYSPLGKIFILQPDEKTSPPHPLLPRGSAFYALDNTKPGYSPSVLRTFLNQPHPIDTLSDPTAYGSEGTILRDHDSSNYLKAVNGVLREHSKILLRRVRSQRINQLWPLLTSPSPHSWSHEQNLERCSLMTKEIVTGV 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01052 727 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 37 715 IPR043367 GO:0008970
Vian6g01052 727 CDD Lipase_3 408 564 - -
Vian6g01052 727 Gene3D alpha/beta hydrolase 364 586 IPR029058 -
Vian6g01052 727 Pfam Lipase (class 3) 425 562 IPR002921 GO:0006629
Vian6g01052 727 SUPERFAMILY alpha/beta-Hydrolases 408 599 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01052 Vian-Chr6 27852206 27856641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01052 371 701 Acyl Lipid Metabolism Gene Families AT3G61680 74.622 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01052 - - gmx:100790575 1164.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01052 6 27852206 27856641 Vian9g00549 9 6292469 6295706 PCT