Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00548 ATGGGAGAACATGAAGGGTGGGCACAGCCACCAAGTGGGCTATTGCCAAATGGTTTGTTGCCCAATGAAGCTGCCTCCGTGATACAGGTGCTTGACTCGGAGCGGTGGTTGAAAGCCGAACAAAGGACTGCAGAGCTGATTGCCTGCATTCAGCCTAATCCACCCTCTGAGGAGCGCCGGAATGCGGTTGCTGACTATGTCCAACGGCTGATCATGAAGTGCTTCCCTTGCCAGGTGTTCACCTTTGGGTCGGTTCCCCTCAAAACTTATTTGCCTGATGGAGATATTGACTTAACAGCATTCAGTAAGAATCAAAATCTGAAGGAGACATGGGCACATCAGGTTCGCGACATGCTGGAGAATGAGGAGAAGAATGAGAATGCAGAGTTTCATGTCAAGGAGGTTCAGTACATCCAGGCCGAAGTAAAAATTATAAAGTGTCTCGTTGAGAATATTGTAGTAGACATTTCATTTAACCAGCTTGGAGGTTTGTGTACCCTATGTTTTCTTGAGGAGGTTGATAATCTGATTAATCAAAATCATTTATTCAAGCGTAGTATTATCCTTATAAAGGCTTGGTGTTACTACGAGAGCCGAATACTCGGTGCCCACCATGGACTTATCTCAACTTATGCTTTAGAGACCTTGGTTCTTTACATTTTTCATGTTTACAACAATTCTTTTGCTGGACCACTTGAGGTGTTGTATCGATTTTTGGAATTCTTTAGTAAGTTTGACTGGGATAATTTCTGTGTAAGTCTATGGGGCCCGGTACCTGTTAATTCACTCCCAGATGTGACAGCTGAACCTCCTCGAAAAGATGGTGGAGATTTACTACTCAGCAAGTTATTTCTCGATGCCTGTAGCTCAGTTTATGCTGTTTTCCCCGGTGGCCAAGAAAATCAGGGGCAACCATTTGTTTCCAAGCATTTCAATGTTATTGATCCTTTGCGTGTCAACAATAACCTTGGTCGTAGTGTCAGCAAAGGTAATTTCTTTAGGATACGCAGTGCCTTTGCATTTGGGGCAAAAAGGCTAGCTAGATTACTTGATTGCCCCGAGGAGGAATTATTTTCTGAGGTGAATCAGTTCTTTTTGAACACTTGGGACAGACATGGAAGTGGGGAAAGGCCTGATGTTCCAACCATTGACTTACAGCGTTTGAGTTTATCCAGTCATGACCAATTACAGAGGTCTGACAATCTCCCGAACAATAACCATAAAATTGATAATGCTTCTAATCATGAATCAAAATCAACTGAAGGCGAACGTTTTTCACAAAGTGTTCTTTCTCAGTATAGTAATTTATTATCTGGAAAGACATCTGGAAGTGTTTCTGCAGTGTCACATACTCAGAATCAAAAGAGTTATGCAAACCAAAATAATTCAAGGACCTTTGATCATGTTAGGCGGGAAACTAATTCTAATCAAGGTACTCATTTTGATAAAGGTCAGAGAAATGTTAAAACTGATAACCTAGTTGGTGATGTTCAGGGAAGGTTTCTGTTTGCCAGGACACGATCTAGCCCTGAGCTGACAGACTCATATGGTGATGTTCCAATCCAAGGAAGACATACAAAAGGAACAGAAAGTAGTAAAGGCCAGAGTTCCTTTGTGAAGTTGGAAAATAGTCGAAGGAAGAACATTGAACCTGATGTAGCTGTAAGAATGGATGAGTCATCTATAAGGCACATCTCATCTCATCGATTTCTTGAAAATGCTGCTGATTCAAACAGTAATCATGATGAGTCAAGCTCTGGTGTAATGGGAGAAGAGTTTGCACCTGTTTCTGGTGCAGTTGGAATGCAGATGATGCATCAAGAGGAGCAGGACCTTTTGAATATGATGGCATCTCCCACAGCTCAGGGTTTCAGTGGTCAGAATCATGTGCCTATGAATATTGCACCTGGTCACCTACCATTTCACTTTCCACCTTCCATTCTTGCCTCAATGGGATATACTCAGAGAAACACGGGTAACATTCCCTTTATCGAGGCTCCTTGGGGTGCAAATATGCAATTTCCTCAAGGTTTCATCCCGCCTTTGACTCCTTATTTCCCTGGCATAGGAATGGCCTCAAATCCTCAAGATTTACTTGAAACTAACCATGAAAATTTCAATTCGGTTGAGGCGAATGTAACAGAAGCTGATGATTATTGGCATGAGCAGGAAAGGAGTTCTGCAAGTGAGATTGAAGTTGATAATGGAAATCTTGAAATGGCCCAAGAAGATAGGCAACAGTCTACTTCAGGTAATTACAACTCTGCTCCGTCATCTCAGGTAGGCAGCTCCAACAGTAACAGTTCTGCTGGAGTTCAGCAGAAGTTTACTAAAGAAAACCGGGGGTCAACCAGAGAAGAGCATATTGACAATTTTCAATTTCCAGATGGCCGAAGAAATGAGGTTTATTTTGATGATAGAACAGCAATTTCAGAGTTATCCAGTGCACCTCCTTCGAGCTCCTTCAGGAGTAGGACCCCTTCTGAAAGCTCTTGGGATGGGTCATCAGTCAAATCCTCAAAATCAACGAGGGAGAGAAGGGGGAGAAAAAGCACTCCCTCAGTGCCATCTCAAAATCCTGTTTATGGGAAGGGTAAGAATGTTTCAGAAAATTCATCTAACCGAGTGGATGTTGAAAACAGAGAATGGACTCATTTGTCAACGGTTCCATCTGACATGCCAGAAAGAGGCACTTGGCCCACATCTGGTACTTCCATACATGTTCCAAGGAATCAAATATCTAGTTTTGAAACTGCTCAGACTAGTGGACCAGATTCTCCATTACCTATAGCTCCCGTGGTTATAGGTCCTGGTTCTCGCCCAAGAGCAGTAGATAATTCTGGGGTTCTTCCGTTTACATTCTATCCTACAGGGCCACCTGTTCCCTTTGTCACCATGCTTCCTTTATATAATTTTCCAACTGAGTCTTCTGACACTTCAACAAGCAACTTCAATGTGGAAGAAGGGGCAGATAACAGTGATTCAAGTCAGAATTTTGATTCATCCGAGGGATATGAACACCCTGAGGTGTCAAGCCCTTCCAATTCTATGGCAAGGGTGGCTATGGAGTCATCAGAGCACAAGCCTGACATTCTTAATAGTGACTTTGTTAGTCACTGGCAAAATTTGCAATATGGCCGATTTTGTCAAAACACGCGTCAACCGCCTTCAGTGATCTATCCTTCACCTGTTATGGTGCCTCCTGTTTATTTGCAGGGTCGATATCCTTGGGATGGTCCTGGAAGACCTATTTCTGGTAACATGAATATTTTTAGTCAGCTTATGAGCTATGGGCCACGTCTGGTTCCTGTTGCTCCTCTTCAGTCAGTTTCTAATAGACCTACCAATATTTACCAACGTTATGTAGATGATATGCCACGGTATAGAAGTGGGACTGGAACCTACCTGCCAAATCCGAAGGTGTCTCCTCGGGATCGACATTCAACAACTACCAGAAGGGGAAGTTACAATTATGATAGAAGTGACCATCATGGTGATAGAGAAGGGAACTGGAATACTAACTCAAAATTGCGGGGAACTGGACGGGGGCATAATCGCAACCAGATGGAGAAGTCCAACTCAAAGCCGGAGCGGTTGTCTACCAGTGAGAGCCGTGCAGAGAGACCATGGAGTTCACATAGGCATGACACCTTCATTCCTCACCAGAATGGTCCAGTTCGCTCAAATTCCTCACAAAGCAATTCTTCCAATGTAACTTATGGAATGTATCCTATACCGGCCATGAACCCAAGTGGTGTCTCATCAAATGGTCCTATGCAATCTGTTGTAATGTTTTATCCTTTTGATCATAATTCTGGCTTCGTACCAGAAGAGCAGCTTGAGTTTGGGACTTTGGGACCAATGGGGTTCTCAGGTGTCAATGAACCGTCACAGGCAAATGAGGGAAGTCAATCTAGTGGAGCACATGAAGAGCAAAGGTTTCGTGGTGGTCACACCCAACGATCTTCACCAGATCAACCCTCCTCACCTCATGTCTCTAGGGCTCCCTGA 4011 0.4353 MGEHEGWAQPPSGLLPNGLLPNEAASVIQVLDSERWLKAEQRTAELIACIQPNPPSEERRNAVADYVQRLIMKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKNQNLKETWAHQVRDMLENEEKNENAEFHVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVYNNSFAGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPVNSLPDVTAEPPRKDGGDLLLSKLFLDACSSVYAVFPGGQENQGQPFVSKHFNVIDPLRVNNNLGRSVSKGNFFRIRSAFAFGAKRLARLLDCPEEELFSEVNQFFLNTWDRHGSGERPDVPTIDLQRLSLSSHDQLQRSDNLPNNNHKIDNASNHESKSTEGERFSQSVLSQYSNLLSGKTSGSVSAVSHTQNQKSYANQNNSRTFDHVRRETNSNQGTHFDKGQRNVKTDNLVGDVQGRFLFARTRSSPELTDSYGDVPIQGRHTKGTESSKGQSSFVKLENSRRKNIEPDVAVRMDESSIRHISSHRFLENAADSNSNHDESSSGVMGEEFAPVSGAVGMQMMHQEEQDLLNMMASPTAQGFSGQNHVPMNIAPGHLPFHFPPSILASMGYTQRNTGNIPFIEAPWGANMQFPQGFIPPLTPYFPGIGMASNPQDLLETNHENFNSVEANVTEADDYWHEQERSSASEIEVDNGNLEMAQEDRQQSTSGNYNSAPSSQVGSSNSNSSAGVQQKFTKENRGSTREEHIDNFQFPDGRRNEVYFDDRTAISELSSAPPSSSFRSRTPSESSWDGSSVKSSKSTRERRGRKSTPSVPSQNPVYGKGKNVSENSSNRVDVENREWTHLSTVPSDMPERGTWPTSGTSIHVPRNQISSFETAQTSGPDSPLPIAPVVIGPGSRPRAVDNSGVLPFTFYPTGPPVPFVTMLPLYNFPTESSDTSTSNFNVEEGADNSDSSQNFDSSEGYEHPEVSSPSNSMARVAMESSEHKPDILNSDFVSHWQNLQYGRFCQNTRQPPSVIYPSPVMVPPVYLQGRYPWDGPGRPISGNMNIFSQLMSYGPRLVPVAPLQSVSNRPTNIYQRYVDDMPRYRSGTGTYLPNPKVSPRDRHSTTTRRGSYNYDRSDHHGDREGNWNTNSKLRGTGRGHNRNQMEKSNSKPERLSTSESRAERPWSSHRHDTFIPHQNGPVRSNSSQSNSSNVTYGMYPIPAMNPSGVSSNGPMQSVVMFYPFDHNSGFVPEEQLEFGTLGPMGFSGVNEPSQANEGSQSSGAHEEQRFRGGHTQRSSPDQPSSPHVSRAP 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00548 1336 MobiDBLite consensus disorder prediction 440 464 - -
Vian9g00548 1336 MobiDBLite consensus disorder prediction 1216 1237 - -
Vian9g00548 1336 MobiDBLite consensus disorder prediction 742 778 - -
Vian9g00548 1336 MobiDBLite consensus disorder prediction 1145 1171 - -
Vian9g00548 1336 FunFam PAP/OAS1 substrate-binding domain superfamily 162 358 - -
Vian9g00548 1336 FunFam PAP/OAS1 substrate-binding domain superfamily 52 161 - -
Vian9g00548 1336 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
Vian9g00548 1336 Gene3D - 162 360 - -
Vian9g00548 1336 MobiDBLite consensus disorder prediction 779 794 - -
Vian9g00548 1336 MobiDBLite consensus disorder prediction 525 542 - -
Vian9g00548 1336 MobiDBLite consensus disorder prediction 1121 1237 - -
Vian9g00548 1336 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 16 1332 - -
Vian9g00548 1336 MobiDBLite consensus disorder prediction 513 543 - -
Vian9g00548 1336 MobiDBLite consensus disorder prediction 1291 1310 - -
Vian9g00548 1336 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 352 - -
Vian9g00548 1336 MobiDBLite consensus disorder prediction 975 1025 - -
Vian9g00548 1336 MobiDBLite consensus disorder prediction 392 410 - -
Vian9g00548 1336 MobiDBLite consensus disorder prediction 1183 1215 - -
Vian9g00548 1336 MobiDBLite consensus disorder prediction 392 425 - -
Vian9g00548 1336 MobiDBLite consensus disorder prediction 1319 1336 - -
Vian9g00548 1336 CDD NT_PAP_TUTase 59 166 - -
Vian9g00548 1336 MobiDBLite consensus disorder prediction 742 794 - -
Vian9g00548 1336 MobiDBLite consensus disorder prediction 852 874 - -
Vian9g00548 1336 SUPERFAMILY Nucleotidyltransferase 22 201 IPR043519 -
Vian9g00548 1336 MobiDBLite consensus disorder prediction 812 907 - -
Vian9g00548 1336 MobiDBLite consensus disorder prediction 1285 1336 - -
Vian9g00548 1336 MobiDBLite consensus disorder prediction 812 838 - -
Vian9g00548 1336 MobiDBLite consensus disorder prediction 975 1021 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00548 Vian-Chr9 6276348 6282913 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00548 - - gmx:100809742 2320.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00548 9 6276348 6282913 Vian9g00548 9 6276348 6282913 ECH
Vian6g01053 6 27858362 27863915 Vian9g00548 9 6276348 6282913 PCT