Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01053 ATGGGCGAGCATGAGGATTGTGCACAGCCACCAAGTGGGATGTTGCCTAATGGTTTGCTGCCCAATGAGGCCGCATCGGTGATTCGAGTGCTTGACATGGAGCGATGGTTGAAGGCTGAGGAAAGGACTGCAGAGCTAATTGCCTGCATTCAACCGAATCCGCCCTCCGAGGAGCGCCGCCATGCAGTTGCAGATTATGTGCAGCGGCTGATCATGAAGTGCTTCCCTTGCCAGGTGTTCACCTTTGGGTCAGTACCCCTCAAAACTTATTTACCTGATGGAGATATTGACCTGACAGCATTCAGCAAGAACCAAAATCTGAAGGATGCGTGGGCACACCAGGTTCATGACATGCTCCAGAATGAGGAAAAGGATGAAAATGCAGAGTTTCATGTCAAAGAGGTTCAGTACATCCAGGCGGAAGTGAAGATTATAAAGTGTCTTGTTGAGAATATTGTGGTGGACATCTCATTTAACCAACTTGGAGGATTGTGCACCCTTTGTTTTCTTGAGGAGGTTGATAATTTGATTAACCAAAACCATTTATTCAAGCGTAGCATTATACTTATAAAAGCCTGGTGTTACTATGAGAGTCGTATACTTGGTGCCCACCATGGACTTATCTCAACTTACGCATTAGAAACTTTGGTTCTTTACATATTTCATGTTTTCAACAATTCCTTTGCTGGACCACTTGAGGTGCTGTATAGGTTTTTGGAGTTCTTTAGTAAGTTTGATTGGGATAACTTCTGTGTAAGTCTATGGGGTCCTGTACCCATCAGTTCACTTCCAGATGTGACAGCTGAACCTCCTCGGAAAGATGGTGGAGATCTATTGCTCAGCAAGTTATTTCTTGATGCCTGCAGTTCAGTTTATGCTGTTTTCCCTGCTGGCCAAGAAAATCAGGGGCAACCATTTACTTCCAAGCATTTCAATGTTATTGATCCTTTGCGTGTCAACAATAACCTTGGGCGTAGTGTCAGCAAAGGAAATTTCTTTAGAATTCGCAGTGCTTTTGCATTTGGGGCCAAAAGGCTTGCTAGATTGCTTGATTGCCCTAAGGAGGATTTGTTTTTAGAAGTTAATCAATTCTTTATGAACACTTGGGTCAGACATGGAACTGGGCAGCGACCTGATGCTTCGAGCCATGACTTATGGCATTTGACATCATCTAGTCATGTCCAATCACACGGGTCTGACAATATCCAGAAAAATAACAATAAAACTGAGAATACCTGTAATCATGAATTTCAAGTAAAAGGGGTGCATGCTTCACAGAGTGTTCTATCTCAACACAGTATATTGTCCTCTAAAAGTTTATCTAAGAGTAGTGGTGATTCTAAAGCTAACCAAAATAATGCAAGGAATTTTGATCAGGTCAAAAGGGAAGCTAACTGCAATCAAGGTGCTCGGGTTGATAAAGGACAGAGAAATGCTAAACCAAATAACGCATTCAATGATGTCCCAGGAAGACTTTTATTTGCAAGAACATGTTCTAGTCCTGAGTTGACAGACTCTTATGGTGAAATTCCCAGGCAAGGAAGACATGCAAAAGCCCCAGAAAGTGGGAAAGGACCAGCATCCTCTGCAACGTTGGAGAATAGTCACAGGAAGCATCTTGATTCTGACATGCCTGCTAGTTATGCCGTTAGAATTGATGATTCATCTGGTAGGAAAATAGTATCACATCAAGTTCTTGACAGCAGTGCTGATTCAAAAAATGGCTCAAATAGTTATGATAATGAATCTGGCCACGGCATTGTGGGGGAAGAGTTTGCTTCTGTTTCTGGAGTAGGTGGAACACATATGATGCATCAGGAGGAGCAGGACCTTTTGAACATGATGACATCACCCGCAACTGAAGGTTTCAGTGGTCAGAATCAAATACCAGTGAATTTAGCTCCAGGTCACATACCACTTCCACTTTCCCCTTCCATTCTTGCATCAATGGGATATGCTCATAGGAACATGGGTAACATTCCCTTAATTGAGTCCTTCAATTGGGGTACTAATGTGCAATTTCCCCAAGGTTTAGTTCCTTCCCCCTGGACTCCATATTTTCCTGGCATAGGATTGACCTCAAATCCTGAAGATTTAATCGAAACTGGTAATGAGAATTTCAATCCTGTTGAAATGAGTCCAGCAGAAGCTGATAAAGATTTCTGGCATGAGCAAGAAAGGGCTGGTGCTGGGGGGATTGACGTGGATAATGGTAATTTTGAAATGGTTCCAGATGATAAGCGACAGTCAACTTCTAGTGGTTACAACTTTATACCATCATCTCATGTTGGCAGCTCTGGTAATTCTGCCATACTTCAGCCAACATTTACTAAAGAAAATCGAGTTTCTACAAGAGAAGAGCACATTGATAGTTCTAAATATCAAGATGGCCGAGGAAATGGTGCATATTTTGATGAAAGAATTGCAAATTCTAGGTTGCCCAGTGAACCATCCTCAAGCTCATTCAGGAGTAAGACGTCTTCAGAAAGCTCTTGGGAGGGACCATCTGCAAAATCTTCAAAATCAACTAGGGAAAAAAGAGGGAAGAAAAATACTTCCTCGGTGCCATCGGCTGCTTATGGTAAGGGCAAGAATGTCTCAGATATTTCCTCTAATCTTGTGGATGATGAAAACAGACAACGGACACCTTTGTCAACTACAGCATCTGATATGTCAGATAGAAGCACTGGGCTGCTTGCTGTTGCTCCTGTGCATGTTCCAAGGCAACCGGTGTCTGGTTCTGAAGTGGTTCGGACAAGTGGATCAGATTCTGTGTTACCCATGGCTCCAGTGCTTATAAGTCATGGTTCTCGCCAAAGAACAGGGGATAATTCTGGGGTTGTTCCATTGGCGTTCTATCCCACAGGGCCACCAGTACCATTTGTTACCATGCTTCCATTATATAATTTTCCTACTACTCAATCTTCCCACACACCAGCAACCAATTTCCATGTGGAAGATGCAGATAACAATGACCATGGTCAGAGTTTTCATCCATCTGAGGTGCATGATCTGCCTGAGGTGTTGAGCTCTTCCAATTCTATGGGAAGAGCTGCTATTGACACAGTAGAGCCCAAGCTTGACATTCTTAATGGTGACTTTGTTAGCCATTGGCAAAATTTGCAGTATGGGCGAATTTGTCAAAATTCACACCAACCTGATTCTGTTAACTATCCTTCATCTGTTGTGGTACCTCCTGTTTATTTGCAGAGTCGTTTTCCCTGGGATGGCCCTGGAAGACCACAGTCAGCTAATGTGAATCTTTTCACTCAGCTTATGAACTATGGGCCACACCTAGTGCCTGTTGCTCCTCTCCATTCAGTTTCCAACAGACCAGCCAATATTTACCAACGATTCATAGATGAGATACCACGGTATCGAAGTGGGACAGGAACCTACCTGCCAAATCCTAAGGTTTCTGTTCGGGATAGACATTCTACAAGCACCAGAAGGGGTAATCACAACTATGACAGAAGTGATCAGCATGGTGAGAGAGAAGGGAATTGGAATGTTAACTCAAAGTTGAGAACAAGTGGGCGTAGCCATTACCGCAGTCAAGCTGAGAGATCTAGCTCAAGGCCAGAAAAGTTGCCAACGGGTGAGAGCCATTCTGAAAGATCATGGGGTTCACATAGACCTGATCCTTTTGTTTCACACCAGAGTGGTCCTGTCCGGTTAAATTCTTCACAGAACAGTCTATCAAATTTGGCTTATGGAATGTACTCTCTACCGGGCTTGCGCCCTAGTGGGATATCATCAAATGGACCAACAATTCCACCTGTTGTAATGTGGTATTCATATGATCATAATGCTGGCTACGGCACACCAGCGGAACAGCTCGAATTTGGAACTCTAGGACCTATGGGTTTCCCCGGTGTCAATGAAGTATCACTGATCAATGAGGGAAGCCAATCTGGTGGAGCTTTTGAGGAGCAAAGGTTTAATGGTGGCACTGCTCAAGAATCGTCACCTGATCAACCTGCTTCACCCAAGTTTCGAAGGTTGTAA 4008 0.4359 MGEHEDCAQPPSGMLPNGLLPNEAASVIRVLDMERWLKAEERTAELIACIQPNPPSEERRHAVADYVQRLIMKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKNQNLKDAWAHQVHDMLQNEEKDENAEFHVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPISSLPDVTAEPPRKDGGDLLLSKLFLDACSSVYAVFPAGQENQGQPFTSKHFNVIDPLRVNNNLGRSVSKGNFFRIRSAFAFGAKRLARLLDCPKEDLFLEVNQFFMNTWVRHGTGQRPDASSHDLWHLTSSSHVQSHGSDNIQKNNNKTENTCNHEFQVKGVHASQSVLSQHSILSSKSLSKSSGDSKANQNNARNFDQVKREANCNQGARVDKGQRNAKPNNAFNDVPGRLLFARTCSSPELTDSYGEIPRQGRHAKAPESGKGPASSATLENSHRKHLDSDMPASYAVRIDDSSGRKIVSHQVLDSSADSKNGSNSYDNESGHGIVGEEFASVSGVGGTHMMHQEEQDLLNMMTSPATEGFSGQNQIPVNLAPGHIPLPLSPSILASMGYAHRNMGNIPLIESFNWGTNVQFPQGLVPSPWTPYFPGIGLTSNPEDLIETGNENFNPVEMSPAEADKDFWHEQERAGAGGIDVDNGNFEMVPDDKRQSTSSGYNFIPSSHVGSSGNSAILQPTFTKENRVSTREEHIDSSKYQDGRGNGAYFDERIANSRLPSEPSSSSFRSKTSSESSWEGPSAKSSKSTREKRGKKNTSSVPSAAYGKGKNVSDISSNLVDDENRQRTPLSTTASDMSDRSTGLLAVAPVHVPRQPVSGSEVVRTSGSDSVLPMAPVLISHGSRQRTGDNSGVVPLAFYPTGPPVPFVTMLPLYNFPTTQSSHTPATNFHVEDADNNDHGQSFHPSEVHDLPEVLSSSNSMGRAAIDTVEPKLDILNGDFVSHWQNLQYGRICQNSHQPDSVNYPSSVVVPPVYLQSRFPWDGPGRPQSANVNLFTQLMNYGPHLVPVAPLHSVSNRPANIYQRFIDEIPRYRSGTGTYLPNPKVSVRDRHSTSTRRGNHNYDRSDQHGEREGNWNVNSKLRTSGRSHYRSQAERSSSRPEKLPTGESHSERSWGSHRPDPFVSHQSGPVRLNSSQNSLSNLAYGMYSLPGLRPSGISSNGPTIPPVVMWYSYDHNAGYGTPAEQLEFGTLGPMGFPGVNEVSLINEGSQSGGAFEEQRFNGGTAQESSPDQPASPKFRRL 1335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01053 1335 MobiDBLite consensus disorder prediction 1302 1327 - -
Vian6g01053 1335 MobiDBLite consensus disorder prediction 564 585 - -
Vian6g01053 1335 MobiDBLite consensus disorder prediction 730 892 - -
Vian6g01053 1335 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 16 1331 - -
Vian6g01053 1335 MobiDBLite consensus disorder prediction 852 892 - -
Vian6g01053 1335 MobiDBLite consensus disorder prediction 1127 1230 - -
Vian6g01053 1335 MobiDBLite consensus disorder prediction 390 409 - -
Vian6g01053 1335 MobiDBLite consensus disorder prediction 780 794 - -
Vian6g01053 1335 MobiDBLite consensus disorder prediction 1143 1169 - -
Vian6g01053 1335 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
Vian6g01053 1335 MobiDBLite consensus disorder prediction 564 583 - -
Vian6g01053 1335 MobiDBLite consensus disorder prediction 433 463 - -
Vian6g01053 1335 FunFam PAP/OAS1 substrate-binding domain superfamily 162 358 - -
Vian6g01053 1335 MobiDBLite consensus disorder prediction 1302 1335 - -
Vian6g01053 1335 MobiDBLite consensus disorder prediction 744 779 - -
Vian6g01053 1335 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 352 - -
Vian6g01053 1335 MobiDBLite consensus disorder prediction 433 464 - -
Vian6g01053 1335 MobiDBLite consensus disorder prediction 1181 1212 - -
Vian6g01053 1335 Gene3D - 162 358 - -
Vian6g01053 1335 FunFam PAP/OAS1 substrate-binding domain superfamily 52 161 - -
Vian6g01053 1335 MobiDBLite consensus disorder prediction 504 546 - -
Vian6g01053 1335 SUPERFAMILY Nucleotidyltransferase 21 201 IPR043519 -
Vian6g01053 1335 CDD NT_PAP_TUTase 59 166 - -
Vian6g01053 1335 MobiDBLite consensus disorder prediction 812 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01053 Vian-Chr6 27858362 27863915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01053 - - gmx:100809742 1889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01053 6 27858362 27863915 Vian9g00548 9 6276348 6282913 PCT