Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00505 ATGAGTGGTTACAACCCCATATTCCTGGTGATCCTCAGCTTGGTCATAGGTTTCGTAATTCGATGGTTGCTCTTCAAAACGGGATTGATACAGAGCATAAGAAAAGTGTTGAGAAGGGTGCAGGATTGGTTCCACGTCCACCAGTTCCTCAAAGTTCCCGAATTCAACGACGCCGTGCAACGGAATCACTTTCACCGCAAAGTTTCTCTCTATTTGCATTCTCTTCCTTCGTTAGAGGACGCTGACTTCACCAATCTCGTTTCCGGTCACGACCAGAACGACATCGTTTTGCGCCTCGACCCAAATCAAACCATCCAGGACCATTTTCTCGGGGCCACACTCTTCTGGTTCGAACAAAAAACCCAACCGGACCGGATTTCATCCTTCGTTCTCAAAATCAGAAAAACCGATAAACGCCGAATCCTCCGCCAGTACCTCCGCCATATCAATACCGTCGCCGAAGAGATGGAGAACCAAAGGAAGCGCCATTTGCGGTTGTTCATGAACGTCGCGGCCGGCGAAGGCAGCAGGGGAGAAACGCGATGGAGATCAGTTCCGTTCACTCATCCAGCGACTTTTGAAACGATAGCGATGGAGAAGGATCTCAAGAACAGAATCAAATCCGATATCGAATCGTTTCTCAAAGCGAAGCAATACTACCGTAAACTCGGCCGCGCGTGGAAGCGGAGCTTCCTATTGTACGGTGCCTCCGGCACCGGAAAATCGAGCTTCGTCGCTGCGATTGCGAACTTTCTCCGCTACGACGTGTACGACACGCTTGCGAGCAGCTACCTCGGTGTGAGGGAGCACAAGCTGTTCGCGCAGGTTGAGGATATTTTCCGGCAGGGCGCTAGTCTCAGCCCCGCCGAGATCAGCGAGTTGATGATCGCGAACCGGAACTCGCCGAGTCGGGCCATAAAATCGGTAATCGGGGCGCTCCAATCGGACGGTGATGGGAGAAAGTACGCGGAGATGATTGGACGGCAGACAGGGGTTGATGACGTGGACGTACCATCCTTTGGTGGGGACGAGTTATTTACGGTTAAAGATTCGCGGAAGTTTTATGGTTTCTTCAAAAAACGGAACGGCAGAAGAACAAACTACCCCAAAATTCAACCCCTTGGCCCATAG 1131 0.5146 MSGYNPIFLVILSLVIGFVIRWLLFKTGLIQSIRKVLRRVQDWFHVHQFLKVPEFNDAVQRNHFHRKVSLYLHSLPSLEDADFTNLVSGHDQNDIVLRLDPNQTIQDHFLGATLFWFEQKTQPDRISSFVLKIRKTDKRRILRQYLRHINTVAEEMENQRKRHLRLFMNVAAGEGSRGETRWRSVPFTHPATFETIAMEKDLKNRIKSDIESFLKAKQYYRKLGRAWKRSFLLYGASGTGKSSFVAAIANFLRYDVYDTLASSYLGVREHKLFAQVEDIFRQGASLSPAEISELMIANRNSPSRAIKSVIGALQSDGDGRKYAEMIGRQTGVDDVDVPSFGGDELFTVKDSRKFYGFFKKRNGRRTNYPKIQPLGP 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00505 376 Pfam Domain associated at C-terminal with AAA 29 116 IPR025753 -
Vian9g00505 376 Coils Coil 142 162 - -
Vian9g00505 376 PANTHER BCS1 AAA-TYPE ATPASE 259 314 - -
Vian9g00505 376 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 281 IPR027417 -
Vian9g00505 376 Gene3D - 183 306 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00505 Vian-Chr9 5496781 5498211 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00505 - K08900 gmx:100787809 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00505 9 5496781 5498211 Vian9g00505 9 5496781 5498211 ECH
Vian6g01085 6 28247393 28248844 Vian9g00505 9 5496781 5498211 PCT