Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00216 ATGGAAAGAATAATTAGGTTTTTTGGTTTGATAACGAAAGAGGAAAAGGGTATGAAGCCTTTTCTTCTGAAATGTGGTTTGGCTTTGGCTCTTACCTTTGCTGGACTTCTCTACTCTCATATCGGAGCCAAGAGAATCAAACCTTCTCCTACTTCCCCCAAGGGACACCCTTCAGGTCATGAAAGCGAAGATAATTTTGTGAGAGGTAAAAAGGCTGCTTCTAGTTCTGGCACCAATCTTTCAGAGGAAAATGTTTTGGATGCTGAAGAAACATGCATCAGCAAGGTGATTGGTAAAAATTCCCCATTGGGTCTTTCTTTGAGGACTAAAAGAAGTGGAGAGAAAGATGAGTTCATCCATCCTGAATTTAATGATCCTATCAAGGATGCTGAATTTGGAGTCATCATTGAAGATAGTTCTTTTAAGAAAGAGGTAGAAACACCAAGGTCAAAAGTAGGATCTCCTATGGCATATGCAAATGTTGACAAAGATGACTATGAGAAAGAGATCAGGAACCTCAGGAGCATGATCAGAATGCTTCAAGAGAGGGAAAGAAACCTTCAGTTTCAACTGCTTGAGTACTGTGGCATTAAAGAGCAACAAGCAGCAGTGATGGAGCTCCAAAATAGATTGAAGATAAGTAATATGGAGGCTAAGATGTTCAATCTGAAGTTTGTGACCTTGCAGTCTGAGAATCGGAGATTGGAGGTACAAGTGGCTGATCATGCGAAACTGGTATCTGAGCTTGAGACTGCAAAAACGAAAGTTAAGTTTTTGAAGAAGAAAATTAAGTATGAAGCTGAACAGAATAGGGAGCATATCATGAATCTTAAGCAAAAAGTTGCCAAGTTGCAGGATCATGAATTTAAAGTTGCTGCTAACGAACAAGAGATTCAAATTAAGCTGAAAAGGCTTAAGGATCTTGAGTGTGAGATAGAGCAATTGAGAAAATCTAATTTGAGACTCCAGATAGAAAATTCTGACTTATCTCGAAGATTGGATTCTACTCAGCTCCTTGCAAATGCTGTTCTAGAAGAAGCCGAGACACAAGCTCTGAAGGAAGAAGGTGAACGTCTCAGACAAGAGAATGAAGGGTTGACGAAAGAACTTGAGCAATTACATGCAGATAGATGTTCAGATCTTGAAGAGTTAGTTTATTTGCGGTGGATAAATGCTTGCTTAAGACATGAACTACGAAGTTATCAGCCCCCACCTGGTAAAACAGCAGCAAGGGACTTAAGTAAAAGCTTGAGTCCTACCTCTGAGAAGAAAGCCAAGCAACTTATACTTGAATATGCAAACAATGATGGGCGAGGGAGCGTTTCTGATGTGGACTCTGACCAATGGTCCTCTTCACAGGCTTCTTGTTTCACAGACTGTGGTGAGCATGATGATTATTCTCTTAATGATACTTCATCTGAGGCCAAAGCTAACAATCCAAGCAAGTCAAGGATTTTTGGCAAGCTTATGAAGCTGATACGAGGCAAAGACAGCCAGCAACAACGTGATCGAGTTATATCTAAAGAAAAATCAATTTCCCGGGTAGATAGCAGCAGTTCACATTTCAGCTTGAGTATATCAACTGGAAATGAGTGTCTTAGGAGCGAATATACGACTCCCTCTGTCACTTCTAGAACTTCCTTTGATTATAACCAAGCCACGAGTATGAAGGATGATAGTAGGAGAAATTCATATAGCCATACCCCAGGAAGCTCCAAGAATTTCAGTCCAATGAGAAGAAGTTCAGCAGATTCCAAAAACCGCCTCGATTCTTTCTCAGAATCCCCTGGCATGGAGAAAACTAATTTGGTCAAATATGCTGAAGCTTTAAAAAATTCCAGTGAAGCCCCCAAACATAAATCACACAGAAGATCAGCAGCATATAGTTCGTTTTAA 1896 0.4019 MERIIRFFGLITKEEKGMKPFLLKCGLALALTFAGLLYSHIGAKRIKPSPTSPKGHPSGHESEDNFVRGKKAASSSGTNLSEENVLDAEETCISKVIGKNSPLGLSLRTKRSGEKDEFIHPEFNDPIKDAEFGVIIEDSSFKKEVETPRSKVGSPMAYANVDKDDYEKEIRNLRSMIRMLQERERNLQFQLLEYCGIKEQQAAVMELQNRLKISNMEAKMFNLKFVTLQSENRRLEVQVADHAKLVSELETAKTKVKFLKKKIKYEAEQNREHIMNLKQKVAKLQDHEFKVAANEQEIQIKLKRLKDLECEIEQLRKSNLRLQIENSDLSRRLDSTQLLANAVLEEAETQALKEEGERLRQENEGLTKELEQLHADRCSDLEELVYLRWINACLRHELRSYQPPPGKTAARDLSKSLSPTSEKKAKQLILEYANNDGRGSVSDVDSDQWSSSQASCFTDCGEHDDYSLNDTSSEAKANNPSKSRIFGKLMKLIRGKDSQQQRDRVISKEKSISRVDSSSSHFSLSISTGNECLRSEYTTPSVTSRTSFDYNQATSMKDDSRRNSYSHTPGSSKNFSPMRRSSADSKNRLDSFSESPGMEKTNLVKYAEALKNSSEAPKHKSHRRSAAYSSF 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00216 631 MobiDBLite consensus disorder prediction 48 82 - -
Vian9g00216 631 Coils Coil 163 190 - -
Vian9g00216 631 MobiDBLite consensus disorder prediction 548 631 - -
Vian9g00216 631 Coils Coil 342 376 - -
Vian9g00216 631 Coils Coil 242 262 - -
Vian9g00216 631 Coils Coil 267 287 - -
Vian9g00216 631 Coils Coil 197 217 - -
Vian9g00216 631 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 19 504 IPR040265 -
Vian9g00216 631 Coils Coil 291 332 - -
Vian9g00216 631 MobiDBLite consensus disorder prediction 402 422 - -
Vian9g00216 631 MobiDBLite consensus disorder prediction 548 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00216 Vian-Chr9 1773618 1776143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00216 - - gmx:100781632 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00216 9 1773618 1776143 Vian9g00216 9 1773618 1776143 ECH
Vian11g00206 11 1910114 1912760 Vian9g00216 9 1773618 1776143 PCT