Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00206 ATGAGATGTTTGTCTCTCTTCAAGGCTCAAAGAGAAATTAGATTAATTGTGAGGATGATGATCGGACAGGAAAAGGGTGTGAAGCCTGTCCTGCTTAAATTTGGTTTGGCTTTGGCTCTTTCGTTTGCTGGATTTCTCTACTCACGCTTCAGAATCAGAAGAATCAAGCCCTCCAAGTCACGCAAGAGGGGTTCTTTCGGTCACGAGAGTGAAGTTAATTCAGGAGGAGGTATAGGGGCAGCACTAAGCACTTGCAACACCATTTCAGCAAGAAATTTTCTATGTTCTGAAGAAACTTGCACCGACAGGGAGATAACTGGCAATTCTCCTCTTGCTCTCTCTCCTGACAGTACACAAAATGGTGATAGAGATGAGTTCCTCCTACCTGAATTTAATGATCTTCTTAAGGTCATAGACTTTGGAGCCACAGTTGTTAGAAATTCTTCTACAATAAATATGGAAGCACCATGGTTAAAAGAATATGCAGATCCCGAGAAGGATGATTACGAGCAAGAGGTAACTGAACTCCGGAACATGATTAGAATGCTTCAAGACAGGGAACAAAGTCTTGAGGTTCAACTGCTCGAGTATTGCGGTCTTAGAGAGCAAGAAACAGCAGTGATGGAGCTGCAAAATAGATTGAAAGCAAGTACTGTGGAGGTAAAGATGTTCAATCTGAAGGTTAAGACCTTACAGTCTGAGAATTTGAGACTAAAGGAGCAGGTCTCCGATCATGGAAAAGTGCTGGCTGAACTTGAGAGTGCAAATGCGCAAGTCAAATTGCTTAATGAGAAAATTAAGTATGAAGTTGAACAGAACAGGGAGCAGATAATAAGTCTTCAACAAAAAGTTTCCAGGTTGCAAGACCAACAGTGCAAAGATGCTGCTTGTGATCAGGACATTCAAATTAAGCTGCAAAAGCTAAAGGAGCTTGAGTCTGAAGCAGAAGAGTTGAGGAAGTCTAATTTAAGATTGCAGATAGAAAATTCTCACTTAGTTCGAAGATTAGATTCTACTCAAATCCTTGCTAATGCAGTTCTGGAAGACCCAGAGGTAGATGCTGTGAAGCAAGAAAGTGAGTGTCTTAAACAAGAAAATGCACGCTTGACGAAGGAAATTGAGCAACTATATTCTGATCGATGTTCAGATCTCGAAGAATTAGTATATATGCGGTGGATAAATGCTTGCTTACGATATGAACTAAGAAACTATGAAGCCCCACCTGGTAAAACGGTTGCAAAGGACTTAAGCAGAAGCCTGAGCCCCACGTCTGAGAGGAAAGCCAAGCAGCTTATACTTGAATATGCAAATGCTGATGGACCAGGGAACATTGTGGACTTTGATATAGATCAATGGTCCTCCTCGCAGGCTTCTTCTCTCACTGACATTGGAGAGTGTGATGATTTTTCTTCTGTAGATAATTCATCTGCTGCCAAAACTAACACCACAAGCCAGACCAAGCTTTTAAGCAAGCTTAGACAACTGATACAAGGTAAAGACAGTTGTCATCACCTTAGTCATGTTTCATCACAAGAAAAATTCAGACGTCAAAATAGCAATCCTCAACGGCAAAGTACTTCAACTGGAATTGAGGGTCTTAGGAGTGAGTTTGCAACTCCCATTGTCACATCCAGAACTTCCCTTGATTTCTCTAGGTTGACGTGTACTCAGGAAGAAGTAAACAGGAGAAATTCAGATAGCGCTTTCATGGAAAGCTCAAAGAAATTCAGTCCACGTAAAAGTGGTTCCTTCTCAGATTCCTTGGGCTTGGAAAAAAATAATTTGGAGAAATACGCAGAAGCTTTAAAAGATTCTAGCGTGAGTGCTAGACAACAAAGACGTAGTAGATCAGCATCATGTAGTTAG 1866 0.4116 MRCLSLFKAQREIRLIVRMMIGQEKGVKPVLLKFGLALALSFAGFLYSRFRIRRIKPSKSRKRGSFGHESEVNSGGGIGAALSTCNTISARNFLCSEETCTDREITGNSPLALSPDSTQNGDRDEFLLPEFNDLLKVIDFGATVVRNSSTINMEAPWLKEYADPEKDDYEQEVTELRNMIRMLQDREQSLEVQLLEYCGLREQETAVMELQNRLKASTVEVKMFNLKVKTLQSENLRLKEQVSDHGKVLAELESANAQVKLLNEKIKYEVEQNREQIISLQQKVSRLQDQQCKDAACDQDIQIKLQKLKELESEAEELRKSNLRLQIENSHLVRRLDSTQILANAVLEDPEVDAVKQESECLKQENARLTKEIEQLYSDRCSDLEELVYMRWINACLRYELRNYEAPPGKTVAKDLSRSLSPTSERKAKQLILEYANADGPGNIVDFDIDQWSSSQASSLTDIGECDDFSSVDNSSAAKTNTTSQTKLLSKLRQLIQGKDSCHHLSHVSSQEKFRRQNSNPQRQSTSTGIEGLRSEFATPIVTSRTSLDFSRLTCTQEEVNRRNSDSAFMESSKKFSPRKSGSFSDSLGLEKNNLEKYAEALKDSSVSARQQRRSRSASCS 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00206 621 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 28 537 IPR040265 -
Vian11g00206 621 MobiDBLite consensus disorder prediction 506 536 - -
Vian11g00206 621 Coils Coil 352 379 - -
Vian11g00206 621 Coils Coil 200 241 - -
Vian11g00206 621 MobiDBLite consensus disorder prediction 561 588 - -
Vian11g00206 621 MobiDBLite consensus disorder prediction 602 621 - -
Vian11g00206 621 Coils Coil 301 328 - -
Vian11g00206 621 Coils Coil 166 193 - -
Vian11g00206 621 MobiDBLite consensus disorder prediction 605 621 - -
Vian11g00206 621 Coils Coil 252 290 - -
Vian11g00206 621 MobiDBLite consensus disorder prediction 570 588 - -
Vian11g00206 621 MobiDBLite consensus disorder prediction 512 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00206 Vian-Chr11 1910114 1912760 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00206 - - gmx:100796238 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00206 11 1910114 1912760 Vian11g00206 11 1910114 1912760 ECH
Vian11g00206 11 1910114 1912760 Vian9g00216 9 1773618 1776143 PCT