Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00195 ATGCTGTCGCCGTTTTCGTCCATGCCGGAAATCCCCGTCGATTTCCGCGCGCCGCCTCCCTCTCCGGTGGCATCCGGCCGGAGATCCACCGTCACCAACGACGACGTTTTGACCGAGTTTCTAGAGGCCTCGCTCCGCGTCCCCGATCTTGTCCTGCCGGACAAGATCTTCCCCAAACAGAAGCACCTCGACGCGCCTCCCGAGGTAGACTTCGTGTCGCTCTGCTTCCACCGCGACGACGCTCTCCGCGACGTCGTTTCCGATTCCCTTGCCAGGATCGGGTGCTTCCAGCTGCTAAACCACGGGATTCCGTCACAGCTGGTGGAGTCAGCCGCCGAGGACGCCGCCGGAGTGTTCCAGGTGCCGCATGCAAAGCGTGCAGCAGCGACTAGGTCACCGGAGAAGCCCTGGGGGTTCGAAGAGTATCACGCCGGAGAGGAGGAAGAAGAAGGTAGTGAAGAATTCGTGTGGTGCAATGAGGAGGAGTTGAAGTCGAAAATGGAGGGAATTTGGCCCATTGGATATCCAAATTTCAGTGAAAAGATGGAAAAGCTTATGTCACGGATAGAAATGGTGGCTATGAAAATGATGCATGTGATACTGAAAAAGAAGAGTGCAGAATTTGACAATGGGAATGAGACAGGGAATGTTTGTTGCATTTATAAGCATGGTGGTGATAATACTAAGGATTCATTGGCTAATTCCTTGAAATATGATGTGATTAGAATGCTGATTAGGGGAACCGATTACTCTCATTCATTGTGCTTTCATCTATGCAATGGCACTTCACAGTTTCATGTTTACTCCAAGAAAAGTTGGCTCTCTTTCTGCCCTGAGCCAGGTGCCCTTATAGTCACTGCTGGAGATCAAATTCAGATATTGAGTGGTGGACTGTACAAAAGTGTGATTGGAAGACCAATATTTAAAGCAGAGAAAAAACAGAGCATTTCAATGGCTTTCCTCTGTTCTCATCAAAACAAGAAGAAGAATTTTGGAAGCCATGGGAGTAGAAGTGTTTCACTTTCCCAGCAAGCCATATTGGCTTTAATTCTGCCCCTTGTGTACCATGTCATGATTTTTCTCTACAAAAAACTTCATTCATGA 1104 0.4873 MLSPFSSMPEIPVDFRAPPPSPVASGRRSTVTNDDVLTEFLEASLRVPDLVLPDKIFPKQKHLDAPPEVDFVSLCFHRDDALRDVVSDSLARIGCFQLLNHGIPSQLVESAAEDAAGVFQVPHAKRAAATRSPEKPWGFEEYHAGEEEEEGSEEFVWCNEEELKSKMEGIWPIGYPNFSEKMEKLMSRIEMVAMKMMHVILKKKSAEFDNGNETGNVCCIYKHGGDNTKDSLANSLKYDVIRMLIRGTDYSHSLCFHLCNGTSQFHVYSKKSWLSFCPEPGALIVTAGDQIQILSGGLYKSVIGRPIFKAEKKQSISMAFLCSHQNKKKNFGSHGSRSVSLSQQAILALILPLVYHVMIFLYKKLHS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00195 367 Pfam non-haem dioxygenase in morphine synthesis N-terminal 78 157 IPR026992 -
Vian9g00195 367 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 9 360 - -
Vian9g00195 367 SUPERFAMILY Clavaminate synthase-like 57 328 - -
Vian9g00195 367 Gene3D - 51 336 IPR027443 -
Vian9g00195 367 MobiDBLite consensus disorder prediction 1 30 - -
Vian9g00195 367 Pfam 2OG-Fe(II) oxygenase superfamily 247 322 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00195 Vian-Chr9 1577611 1579034 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00195 - - gmx:100786234 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00195 9 1577611 1579034 Vian9g00195 9 1577611 1579034 ECH
Vian11g00192 11 1724122 1725896 Vian9g00195 9 1577611 1579034 PCT