Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00192 ATGGATTTCCATGCCCCGCCGCCATCTCCTGTGGCCACTGCCAGGCGAACGTCCTCGCTCTCCAACGACGACGTTTTCCGCCGATTCTTGGAGACCTCTCTCCGTCTCCCCAACATTAACAACAACCACCAAAAGCCGCTTCCAAAGGTGGACTTCCCCTCCTTAGGTTCCGACGATGCTCTTCGTCACGTCATTTCGGACTCTTTCGCAACTGTCGGATGCTTTCAGCTGCTCAACCATGGGATTCCACTGGACGTGATCGCGTCGCCGGCGGAAGCTTCCATCTCAATTTTCCAGGTGCCGCCGGAGAAGCGAGGCGGCGTGACGAGGTCAGCGGAGAGCCCGTGGGGTTTCGAGGAAGATGACGAGTTCGTCTGGGGAAGAGATAAGGAGTTCAACCTCAGAATGCAGCAAGTTTCGGCAGCCGGATATTCCAATTTCAATAAGAAGATGGAGAATCTTGTGGCCAGGATAGAGAAGGTGGCCGAGAAAATTTTGCAAGTGATATTCGAAGATTCTCCCCCAAAAGTTGCAGACTCTGTGGAGATGATTGGTGGGCATGAACGTGGGACAGTTTGTTCTGTTTATAAGCACTGCTCTGATAAGACGTCAGGACAATGTGCTAACTCTATAAACTATGATGTGATTAGAATGGTGATGAGGGGAAACCGATACTCTCATTGCTTGTGCTTGCATCTATGTGGCGGGTCTTCTGAGTTTCAGGTTTACTCTAAGAAAGGTTGGCTCTCTTTCTTTCCAGAAAAAGGAGCCCTTGTAATCACCGCCGGAGACCAAACTCAGATGTTGAGTGATGGGCAGTACAAGCACGTGATTGGAAGACCAATATTTAAAGGGCAGAAAGATGACTGCATTTCAATGGCTTTCCTATATTCACCGCCAAACAACAAGACCAATTTTCAAAACAGTGGGGAAAGAACTATTTCACTGGGCTTGCAAGTCCTATTGGCCATGATTTTGACCCTTGTGTGTCATGTCCTGATTTCACCAAAGAAGTCTGTCCATAGTCTGCTGGGCAAAAATGCGCAAAGTCCAGACCAGAATTGTACCCGTTACCCGTCGTATTGA 1086 0.4899 MDFHAPPPSPVATARRTSSLSNDDVFRRFLETSLRLPNINNNHQKPLPKVDFPSLGSDDALRHVISDSFATVGCFQLLNHGIPLDVIASPAEASISIFQVPPEKRGGVTRSAESPWGFEEDDEFVWGRDKEFNLRMQQVSAAGYSNFNKKMENLVARIEKVAEKILQVIFEDSPPKVADSVEMIGGHERGTVCSVYKHCSDKTSGQCANSINYDVIRMVMRGNRYSHCLCLHLCGGSSEFQVYSKKGWLSFFPEKGALVITAGDQTQMLSDGQYKHVIGRPIFKGQKDDCISMAFLYSPPNNKTNFQNSGERTISLGLQVLLAMILTLVCHVLISPKKSVHSLLGKNAQSPDQNCTRYPSY 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00192 361 Pfam non-haem dioxygenase in morphine synthesis N-terminal 47 111 IPR026992 -
Vian11g00192 361 Coils Coil 144 164 - -
Vian11g00192 361 Gene3D - 16 312 IPR027443 -
Vian11g00192 361 SUPERFAMILY Clavaminate synthase-like 25 303 - -
Vian11g00192 361 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 2 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00192 Vian-Chr11 1724122 1725896 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00192 - - pvu:PHAVU_005G166600g 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00192 11 1724122 1725896 Vian11g00192 11 1724122 1725896 ECH
Vian11g00192 11 1724122 1725896 Vian9g00195 9 1577611 1579034 PCT