Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00137 ATGGGCGCTTCTCTGCCGAACAAGGAGGCCAACCTCTTCAAGCTCATCGTCAAATCATATGAAACCAAACAGTATAAAAAGGGCCTCAAAGCTGCTGATACCATTTTGAAAAAATTTCCAGACCATGGAGAAACTTTATCGATGAAGGGTTTGACACTAAATTGCATGGATCGTAAGTCTGAAGCATATGAACTTGTTCGTCAAGGATTAAAGAATGACCTTAAAAGTCATGTTTGCTGGCATGTTTTTGGTCTCCTTTATCGATCAGACAGAGAATACAGGGAAGCGATCAAGTGCTATCGAAATGCACTGAAAATAGATCCTGACAATATTGAAATTCTTCGTGACCTATCACTCCTACAGGCACAAATGCGAGATTTATCAGGCTTTGTTGAGACAAGACAACAACTTTTGACTTTGAAGCCAAATCATCGCATGAATTGGATTGGATTTTCCGTAGCCCATCATTTGAATTCCAATGCATCCAAAGCAGTTGAAATTTTGGAAGCGTATGAAGGGACTTTGGAAGAGGATTATCCTCCAGAAAATGAACGGTGTGAGCATGGGGAAATGCTTTTGTACAAGATCTCGTTGTTAGAGGAATGTGGGTTTCTCGAGAGAGCTCTTGAGGAGTTGCACAAAAAAGAATTTAAAATTGTTGATAAGCTTGAATACAAAGAACAGGAGGTGTCACTTTTAGTAAAGCTTGGTCACTTACAAGAAGGCGAAGCTTTGTACCAGGCATTACTTTCCATGAATCCTGATAATTATAGATACTATGAAGGACTTCAAAAGTGTGTTGGACTTTATTTAGAAGATGGACAGTACTCGCCTGATCAAATAGATCAGTTAGATTCCTTGTACAAAACACTTGTACAACAATACAAGTGGTCTTCTGCTGTTAAGAGAATACCGCTAGATTTTCTACAAGGTGACAAATTTCGAGAAGCAGCAGACAATTATATTAGGCCTCTCTTAACCAAGGGCGTTCCCTCTCTGTTCTCTGATCTATCATCCTTGTACAATCACCCTGGGAAGGCAGACATTTTGGAACAACTTATTCTTGAGTTAGAGCAGTCAATCAGGATGACAGGCCAATATCCTGGAGGGACGAACAAAGAACCCCCTTCAACTCTTATGTGGACTTTGTTTTTATTGGCTCAGCATTATGACAGGCGGGGTCAATTTGAAATTGCTCTTTCTAAAATTGATGAAGCTATAGAACATACACCCACAGTCATTGATCTATATTCTGTCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGGTTGCTGCTGCTGCATTTGCAGATGAGGCTAGGTGTATGGATCTTGCTGATCGTTATGTTAACAGTGAGTGTGTTAAACGGATGCTGCAGGCTGATCAGGTGTCTTTGGCTGAAAAAACTGCTGTATTGTTCACAAAGGATGGGGATCAACACAATAACCTTCATGACATGCAGTGCATGTGGTATGAGCTTGCGTCTGGTGAAAGCTATTTCCGCCAGGGTGATCTTGGACGGGCTCTCAAAAAATTTTTAGCCGTGGAGAAGCATTATGCTGATATCACGGAGGACCAATTTGATTTTCATTCTTACTGCTTACGGAAAATGACATTGCGATCTTACGTGGAAATGCTTAAATTTCAAGACCAATTGCATTCACATTCATATTTTCACAAAGCAGCCGCAGGGGCTATCAGATGCTATATTAAGTTGCATGATTCTCCCCCAAAGTCTACAGCTGAGGAAGATGATGATATGGCGAAGTTACTTCCTTCTCAGAAGAAGAAAATGAGGCAAAAGCAGAGAAAGGCAGAAGCAAGAGCCAAAAAAGAGGCAGAAGAAAAGAATGAAGAGTTGAGTGCAAGTGGGATATCGAAGTCTGGGAAGCGGCATGTAAAACCTGTTGATCCTGATCCAAACGGGGAGAAGTTGTTAAAGGTTGAAGATCCACTGTCAGAAGCTACTAAATACTTGAAGTTGCTGCAGAAGAATTCCCCTAATTCATTGGAGACACACTTGCTCTCTTTTGAATTATATACAAGGAAGCAAAAGACTTTGCTTGCCTTTCAGGCTGTGAAGCAGTTACTGAGATTGGACCCTGAACACCCTGATTCTCATCGTTGCCTGATTAAATTCTTCCATAAAGTGGGATCCATGAATGCTCCCGTGACTGACAGTGAGAAACTGATTTGGAGAGTCTTAGAGGCTGAGCGACCAAATATTAGCCAGGTGCATGAGAAATCCCTGTTTGAGGCAAACAACTCTGTCCTTGAAAAGCATAAAGATTCTTTGATGCATAGAGCAGCTTTTGTAGAAATCTTGCACATTTTGGATTCAAACAGAAAATCCGAGGCTGTTAAGTTCGTTGAAGAAACAACAAATAACACTGTGCCCAGAAATGGAGCACTTGGACCAATCAGGGAATGGAAACTTAAAGACTGTATTGCAGTTCACAATCTTCTAGAAACAGTTCTTGCTGATCAGGATGCTGCATTGAGATGGAAGGTGCGATGTGCGGATTACTTTCCATATTCTACGTACTTTGAGGGAAAGCACAGCTCTGCCTCTCCCAACTCGACCTTCAACCAGTTACGTAAGAACTCTGAAAATGAGAGTGTTAACCACATCACATCAAACGGGAAACTAGAGGCATTTAAAGATCTCACTATCTGA 2679 0.4125 MGASLPNKEANLFKLIVKSYETKQYKKGLKAADTILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVFGLLYRSDREYREAIKCYRNALKIDPDNIEILRDLSLLQAQMRDLSGFVETRQQLLTLKPNHRMNWIGFSVAHHLNSNASKAVEILEAYEGTLEEDYPPENERCEHGEMLLYKISLLEECGFLERALEELHKKEFKIVDKLEYKEQEVSLLVKLGHLQEGEALYQALLSMNPDNYRYYEGLQKCVGLYLEDGQYSPDQIDQLDSLYKTLVQQYKWSSAVKRIPLDFLQGDKFREAADNYIRPLLTKGVPSLFSDLSSLYNHPGKADILEQLILELEQSIRMTGQYPGGTNKEPPSTLMWTLFLLAQHYDRRGQFEIALSKIDEAIEHTPTVIDLYSVKSRILKHAGDLVAAAAFADEARCMDLADRYVNSECVKRMLQADQVSLAEKTAVLFTKDGDQHNNLHDMQCMWYELASGESYFRQGDLGRALKKFLAVEKHYADITEDQFDFHSYCLRKMTLRSYVEMLKFQDQLHSHSYFHKAAAGAIRCYIKLHDSPPKSTAEEDDDMAKLLPSQKKKMRQKQRKAEARAKKEAEEKNEELSASGISKSGKRHVKPVDPDPNGEKLLKVEDPLSEATKYLKLLQKNSPNSLETHLLSFELYTRKQKTLLAFQAVKQLLRLDPEHPDSHRCLIKFFHKVGSMNAPVTDSEKLIWRVLEAERPNISQVHEKSLFEANNSVLEKHKDSLMHRAAFVEILHILDSNRKSEAVKFVEETTNNTVPRNGALGPIREWKLKDCIAVHNLLETVLADQDAALRWKVRCADYFPYSTYFEGKHSSASPNSTFNQLRKNSENESVNHITSNGKLEAFKDLTI 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00137 892 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 1 826 - -
Vian9g00137 892 Gene3D - 505 725 - -
Vian9g00137 892 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Vian9g00137 892 SUPERFAMILY TPR-like 381 707 IPR011990 GO:0005515
Vian9g00137 892 MobiDBLite consensus disorder prediction 577 594 - -
Vian9g00137 892 FunFam N-terminal acetyltransferase A, auxiliary subunit 2 503 - -
Vian9g00137 892 SMART tpr_5 43 76 IPR019734 GO:0005515
Vian9g00137 892 SMART tpr_5 77 110 IPR019734 GO:0005515
Vian9g00137 892 SMART tpr_5 380 413 IPR019734 GO:0005515
Vian9g00137 892 MobiDBLite consensus disorder prediction 577 646 - -
Vian9g00137 892 Pfam TPR repeat 84 123 - -
Vian9g00137 892 MobiDBLite consensus disorder prediction 606 622 - -
Vian9g00137 892 FunFam N-terminal acetyltransferase catalytic subunit (NAT1) 505 725 - -
Vian9g00137 892 MobiDBLite consensus disorder prediction 853 877 - -
Vian9g00137 892 SUPERFAMILY TPR-like 21 262 IPR011990 GO:0005515
Vian9g00137 892 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 696 IPR021183 -
Vian9g00137 892 MobiDBLite consensus disorder prediction 631 646 - -
Vian9g00137 892 PIRSF NAT_A 1 818 IPR021183 -
Vian9g00137 892 Gene3D - 2 503 - -
Vian9g00137 892 Coils Coil 596 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00137 Vian-Chr9 1067261 1081839 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00137 K20792 - gmx:100820094 1640.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00137 9 1067261 1081839 Vian9g00137 9 1067261 1081839 ECH
Vian11g00137 11 1209291 1224831 Vian9g00137 9 1067261 1081839 PCT