Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00137 ATGGGTGTTTCTCTTCCTCCCAGAGAGGCTAACCTCTTCAAGCTTATTGTTAAATCCTATGAAACCAAACAATACAAAAAGGGCCTTAAAGCAGCCGATGCCATTTTGAAAAAATTCCCAGACCATGGAGAAACTTTATCAATGAAGGGGTTGACATTGAATTGCATGGATCGTAAGTCCGAGGCATACGAATTGGTTCGCCATGGATTGAAGAATGACCTTAAAAGTCATGTTTGCTGGCACGTTTATGGTCTCCTTTATCGGTCGCACAGAGAATACAGGGAGGCAATAAAGTGCTATCGCAATGCATTGAAAATAGATCCTGACAATATTGAAATATTGCGGGACTTGTCACTTTTACAGGCTCAAATGCGAGATTTAACTGGCTTTGTTGAGACACGACAACAACTTCTGACACTCAAGTCAAATCATCGCATGAACTGGATTGGCTTTGCTGTTGCACATCATTTGAACTCTAGTGCATCAAAGGCTATTGAAATTCTTGAAGCGTATGAAGGGACTTTGGAAGATGATTATCCTCCAGAAAATGAACGATGTGAACATGGAGAAATGCTTTTGTATAAGATCTCCTTGTTGGAAGAATGTGAACTTTTCCAGAAAGCTCTTGAGGAGTTGCAAAAGAAAGAGTTAAAAATTGTTGATAAGCTTGCCTATAAAGAGCAGGAGGTCTCACTTCTAGTCAAGCTTGGTCACTTAGAAGAAGGGGAGAAATTGTACCGCGCATTACTTAGCATGAACCCTGACAATTATAGATATTATGAAGGCCTCCAAAAATGTGTTGGATTATATTCAGAAAATGGCCATTTTTCTCCTGATGAAATTGATCAGTTAGATGCCTTGTACAAAACACTTGAGCAGCAATATAAGTGGTCTTCTGCTGTTAAGAGAATACCACTGGATTTTTTACAAGGTGACAAGTTTAGAGAAGCGGCACATAGTTATATTAGGCCTCTCCTAACTAAGGGAGTTCCATCTCTTTTCTCCGATCTTTCTTCGTTATACAATCAACCTAGGAAGGCAGACGTTTTGGAACAGATCATTCTTGAGTTAGAGAGTTCACTTAAGTCCACTGGTCAATACCCTGGACGGATGGAAAAAGAGCCACCTTCAACTCTGATGTGGACATTGTTCTTCTTGGCTCAGCATTATGACAGACTGGGCCAATATGAAATTGCTCTTTCTAAAATTGATGAGGCTATTTGTCACACGCCTACTGTCATTGATCTGTATTCGGTCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGGTTGCTGCTGCTGCATTTGCAGATGAAGCTAGATGTATGGATCTTGCTGATCGATATGTAAATAGTGAATGCGTTAAGCGCATGCTGCAGGCTGATCAGGTGGCTTTGGCAGAAAAAACTGCTGTATTGTTCACAAAAGATGGTGATCAGCACAACAACCTACATGATATGCAGTGCATGTGGTACGAGCTTGCCTCTGCTGAAAGCTATTTCCGCCAAGGTGATCTTGGACTGGCTCTAAAGAAATTTCTAGCTGTGGAGAAGCATTATGCTGATATTACCGAAGATCAATTTGATTTTCATTCATACTGCTTACGGAAAATGACATTGCGTCCATACGTGGAAATGCTTAAATTTCAAGACCAATTGCATTCGCATGCATACTTTCATAAAGCAGCCGTTGGAGCTATCAGATGCTATATCAAATTGCATGATTTTCCTCCAAAGTCAACAGCCGAGGAAGATAATGACATGTCTAAGTTGCTTCCTTCACAGAAAAAGAAAATGAGGCAAAAACAAAGAAAGGCAGAAGCTAGAGCTAAGCAAGAGGCAGAAATAAAAAATGAAGAATCAAGTGCTGGTGGGGTATCAAAGTCTGGGAAACGGCATGCAAAACCTGTTGATCCTGATCCACGTGGTGAAATATTGATGCAGGTTGAAGATCCGTTGTTGGAAGCCACAAAATACTTGAAGCTGCTTCAGAAGAATTCACCTGACTCATTGGAGACACACATTCTCTCTTTTGAATTATATATGAGAAAACAGAAAATTTTACTTGCCTTCCAGGCTGTTAAGCAGTTACTGAGGTTGGATACTGAACACCCTGATTCTCATCGTTGTCTGATTAAATTCTTCAATAAAGTGGGATCCATGAATGTTCCTGTGACTGACAGTGAGAAACTTGTTTGGAGTGTCTTGGAAGCTGAGCGCCAAACGATTAGTCAGCTGCATGGGAAATCTCTGTTTGAGACAAATAATTCTTTCCTTGAAAAACATGAAGATTCTTTGATGCATAGAGCTGCTTTTGGGGAAATGTTGTATGTTTTGGATCCCAACAGAAGGCCTGAGGCTGTCAAGTTGATTGAAGGGTCAACAAATAACCTTGTGCCAAGAAATGGTGTGCTTGGACCGTTCGGGGAATGGAAACTTAAAGATTGTATTGCAGTTCATAAGCTTCTTGAAACAGTTCTTGTTGATGAGGATGCTGCATTAAGATGGAAAGAGCGTTGTGCCAAGTTTTTCCCGTACTCCACGTACTTTGAGGGCAGTCGTAGCTCTGCCTTTAATCAGATAGGCAAGAGCACTGAAAATGGGAGTTCTAACCATGTGGAATCCACCCCATCAAATGGGAAACTAGAGGCATTTAAAGATCTCACCATCTGA 2673 0.4093 MGVSLPPREANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRHGLKNDLKSHVCWHVYGLLYRSHREYREAIKCYRNALKIDPDNIEILRDLSLLQAQMRDLTGFVETRQQLLTLKSNHRMNWIGFAVAHHLNSSASKAIEILEAYEGTLEDDYPPENERCEHGEMLLYKISLLEECELFQKALEELQKKELKIVDKLAYKEQEVSLLVKLGHLEEGEKLYRALLSMNPDNYRYYEGLQKCVGLYSENGHFSPDEIDQLDALYKTLEQQYKWSSAVKRIPLDFLQGDKFREAAHSYIRPLLTKGVPSLFSDLSSLYNQPRKADVLEQIILELESSLKSTGQYPGRMEKEPPSTLMWTLFFLAQHYDRLGQYEIALSKIDEAICHTPTVIDLYSVKSRILKHAGDLVAAAAFADEARCMDLADRYVNSECVKRMLQADQVALAEKTAVLFTKDGDQHNNLHDMQCMWYELASAESYFRQGDLGLALKKFLAVEKHYADITEDQFDFHSYCLRKMTLRPYVEMLKFQDQLHSHAYFHKAAVGAIRCYIKLHDFPPKSTAEEDNDMSKLLPSQKKKMRQKQRKAEARAKQEAEIKNEESSAGGVSKSGKRHAKPVDPDPRGEILMQVEDPLLEATKYLKLLQKNSPDSLETHILSFELYMRKQKILLAFQAVKQLLRLDTEHPDSHRCLIKFFNKVGSMNVPVTDSEKLVWSVLEAERQTISQLHGKSLFETNNSFLEKHEDSLMHRAAFGEMLYVLDPNRRPEAVKLIEGSTNNLVPRNGVLGPFGEWKLKDCIAVHKLLETVLVDEDAALRWKERCAKFFPYSTYFEGSRSSAFNQIGKSTENGSSNHVESTPSNGKLEAFKDLTI 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00137 890 MobiDBLite consensus disorder prediction 580 643 - -
Vian11g00137 890 Pfam TPR repeat 84 123 - -
Vian11g00137 890 SUPERFAMILY TPR-like 60 440 IPR011990 GO:0005515
Vian11g00137 890 Gene3D - 2 503 - -
Vian11g00137 890 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Vian11g00137 890 SMART tpr_5 43 76 IPR019734 GO:0005515
Vian11g00137 890 SMART tpr_5 380 413 IPR019734 GO:0005515
Vian11g00137 890 SMART tpr_5 77 110 IPR019734 GO:0005515
Vian11g00137 890 MobiDBLite consensus disorder prediction 580 594 - -
Vian11g00137 890 SUPERFAMILY TPR-like 13 123 IPR011990 GO:0005515
Vian11g00137 890 FunFam N-terminal acetyltransferase A, auxiliary subunit 2 503 - -
Vian11g00137 890 Coils Coil 600 622 - -
Vian11g00137 890 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 696 IPR021183 -
Vian11g00137 890 Coils Coil 195 215 - -
Vian11g00137 890 Gene3D - 505 724 - -
Vian11g00137 890 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 1 826 - -
Vian11g00137 890 FunFam N-terminal acetyltransferase catalytic subunit (NAT1) 505 725 - -
Vian11g00137 890 PIRSF NAT_A 1 818 IPR021183 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00137 Vian-Chr11 1209291 1224831 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00137 K20792 - gmx:100776968 1582.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00137 11 1209291 1224831 Vian11g00137 11 1209291 1224831 ECH
Vian11g00137 11 1209291 1224831 Vian9g00137 9 1067261 1081839 PCT