Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00126 ATGCCCGAGACAGCTACTACACCAACGGATTCCTCCACTAATAGTCTCTTCGAGCTTCTCACCGAAATGAAGAAGCAATCTTGGCCAGAATCACTCACCTTTCAAGCAAAATCTCCCTCCCAACACTGCTCCGAATGCTGGTTCGACGATGCATGCATCTTGGACATGGATTACTTCGTGAAGACCCTTTCTGGAATCAAGGCCAAAGGTGTTCGTGCAGACCTTATTGGCTCCATCATCACTCACTATGCCTCCAAATGGCTCCCTGATCTTTCTGCAGGTGATATGGTCGAAAAGGGTCTCACCCAAATCGAGGAATCACCGGAAAGCGTGACGGCTTCATGGATGAAGAAGAGGTTCTTCGTGGAAACCTTGGTGGGTGTTCTGCCTCCTGAGAAAGATGCAATTCCATGTAACTTTATGCTCAGGCTTCTGAGAACGGCCAACATGGTTGGAGTTGAGGGTAACTACAGGCAAGAGCTTGAGAAGCGTATTTCGTGGCAATTAGACCAGGCTTCGTTGAAGGAGTTGGTGATTCCATCTTTCAGCCACACTTGTGCCACTCTCTTGGATGTTGAACTTGTCATTAGGCTGGTTCAGAGGTTCGTGAGTTTGGACAGTGACGGGGCTAAGAGTGTTGCTTCTTTGGTTAAGGTAGCTAAGTTAGTCGATTCCTACCTCGCTGAGGCTGCTGTGGACTCCAATTTGAGCTTGAACGACTTCGTTACCCTTGCCGCCGCTCTTCCTAGCCATGCAAGAGCAACGGATGATGGCTTGTACCGTGCCATTGATACCTATCTTAAAGCACATCCAGCAGTGTCAAAGCAAGAAAGGAAGGGTCTTTGCAGGTTAATCGACAGCAGAAAACTGACCCCAGAGGCATCACTGCATGCAGCACAGAACGAACGATTTCCAGTGAGAGCAGTGATTCAGGTGCTGCTTTCTGAGCAAAGCAAACTGTCACGGCACGTGGATTGGAGCGGTTCGTTGGTGAGTGGGACAAGAAGCCCCAGTACGTTCGAGTTACCGACACGGTGTCTGTCGAAGCGTGAGGTGAACGCGCAGCAGCACGAGATAAGGAAGCTGAAGGACGACGTGTACAGGTTGCAGAGCCAGTGCAACGCCATGCAGGCTCAGATGGAGAGAATGGTGGAGAAGAAAAAGGGGTTCTTCAAGTGGAAGAAGTTTGCTTTTGGCAAAGCTGAACATGAAAAAATGGAACTTGAGCTTGAAGGGAATGAAATGTACACGCCTGCTGGTCTCAAAACCAGATTGGTCAATGTCAAAGGTAGCAAGAACAACAACACTCACAAGTGGAGGAAATCTATGTCGTGA 1335 0.4899 MPETATTPTDSSTNSLFELLTEMKKQSWPESLTFQAKSPSQHCSECWFDDACILDMDYFVKTLSGIKAKGVRADLIGSIITHYASKWLPDLSAGDMVEKGLTQIEESPESVTASWMKKRFFVETLVGVLPPEKDAIPCNFMLRLLRTANMVGVEGNYRQELEKRISWQLDQASLKELVIPSFSHTCATLLDVELVIRLVQRFVSLDSDGAKSVASLVKVAKLVDSYLAEAAVDSNLSLNDFVTLAAALPSHARATDDGLYRAIDTYLKAHPAVSKQERKGLCRLIDSRKLTPEASLHAAQNERFPVRAVIQVLLSEQSKLSRHVDWSGSLVSGTRSPSTFELPTRCLSKREVNAQQHEIRKLKDDVYRLQSQCNAMQAQMERMVEKKKGFFKWKKFAFGKAEHEKMELELEGNEMYTPAGLKTRLVNVKGSKNNNTHKWRKSMS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00126 444 Coils Coil 352 379 - -
Vian9g00126 444 ProSiteProfiles NPH3 domain profile. 45 319 IPR027356 -
Vian9g00126 444 PANTHER OS12G0117600 PROTEIN 31 407 IPR043454 -
Vian9g00126 444 Pfam NPH3 family 46 295 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00126 Vian-Chr9 961814 963601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00126 44 388 EF-hand Containing Proteins AT3G44820 33.158 1.28e-53 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00126 - - gmx:100777676 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00126 9 961814 963601 Vian9g00126 9 961814 963601 ECH
Vian11g00124 11 1084022 1086039 Vian9g00126 9 961814 963601 PCT