Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00119 ATGAGCTATGGACATTATCATATGGGCTCTGGTAGTAGAACTGGTCGGAGAAGTTTGGAGTTTGGGAAGACACATGTGGTGAGGCCAAAAGGAAAACACCAAGCCACTATAGTTTGGCTGCATGGTCTTGGTGACAATGGTTTAAGCTCATATCAGCTGCTGGAATCTCTTCCACTTCCAAATATAAAATGGATTTGCCCAACTGCTCCTATCCGCCCTGTAACAATACTTGGTGGTTTTTCCTGCACTGCATGGTTTGACATGGGAGAACTTTCAGAAGACGGTCCAGATGATTGGGAGAGTTTAGATGCCTCAGCAGCACACATTGCCAACTTGTTATTAACAGAGCCAGCTGATGTGAAAGTTGGAATTGGAGGCTTCAGTATGGGTGCTGCAGTAGCTCAATACTCTGCAACTTGTTTTGCCATGGGAAGGTATGGAAATGGCATCCCGTATCCAGTGAACCTAAGAGCAGTTGTTGGACTAAGTGGCTGGCTTCCAGGATCAATGAGCTTAAGGAACAAAATCGAAGTGTCACATGAAGCTAGAAGGAGAGCTGCTTCATTACCTCTTTTGTTGGGCCATGGAATCTGTGATGATGTAGTCCTCTACAAATACGGAGAGAAATCAGCTCAATCCTTAAGTTCAGCAGGCTTTCGATACATTACATTCAAATCCTATGATGGGCTTGGTCACTATACTGTTCCAAGGGAGATGGATGAGGTCTCCAATTGGCTTAACTCAAGGCTGGGGCTTGGGGGATCATCATGA 771 0.4527 MSYGHYHMGSGSRTGRRSLEFGKTHVVRPKGKHQATIVWLHGLGDNGLSSYQLLESLPLPNIKWICPTAPIRPVTILGGFSCTAWFDMGELSEDGPDDWESLDASAAHIANLLLTEPADVKVGIGGFSMGAAVAQYSATCFAMGRYGNGIPYPVNLRAVVGLSGWLPGSMSLRNKIEVSHEARRRAASLPLLLGHGICDDVVLYKYGEKSAQSLSSAGFRYITFKSYDGLGHYTVPREMDEVSNWLNSRLGLGGSS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00119 256 MobiDBLite consensus disorder prediction 1 20 - -
Vian9g00119 256 SUPERFAMILY alpha/beta-Hydrolases 25 250 IPR029058 -
Vian9g00119 256 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 255 - -
Vian9g00119 256 Pfam Phospholipase/Carboxylesterase 24 247 IPR003140 GO:0016787
Vian9g00119 256 Gene3D alpha/beta hydrolase 16 251 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00119 Vian-Chr9 905459 908432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00119 6 255 Acyl Lipid Metabolism Gene Families AT3G15650 74.400 1.24e-124 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00119 K06130 - gmx:100782153 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00119 9 905459 908432 Vian11g00117 11 996927 999639 ECH
Vian4g00639 4 7696014 7703516 Vian9g00119 9 905459 908432 ECH
Vian9g00119 9 905459 908432 Vian9g00119 9 905459 908432 ECH
Vian11g00117 11 996927 999639 Vian9g00119 9 905459 908432 PCT