Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00093 ATGCTTGGTTTGGGTGCGGACCTCTTGTGGGCCGACATGAACCGTCTGCTTGCCTTCCTCTTCCACCAGGGAGTGTTGGATGAGCAATTCTTGCAGCTTCAGCAGCTGCAGGATGAGACCTCCCCAAACTTCGTATCCGAGGTTGTCAACATCTATTTCCATGAATCCGAAAAGCTTCTCACCAATCTCAGAGCTTCGCTCATGGAGAGGGAGTTTTCGGACTATAAGAAAATGGGGAATCATTTGAATCAGTTCATGGGAAGTAGCTCCAGCATTGGCGCGAAGAGAGTTAGAAACGTTTGCGTTGCATTTCGTGCCGCTGCTGAGCAGAATAACCGTGCTGGCTGCTTGCGAGCGTTGGAGATGCTGGAGCATGAGTACTGCTATCTCAAGAACAAATTGCATGAATTGTTTCAGATTGAGCAGCAACGTGCTTTGGCTGCAGGAGTTAGATACCCAGTGCAGGATTAG 471 0.4926 MLGLGADLLWADMNRLLAFLFHQGVLDEQFLQLQQLQDETSPNFVSEVVNIYFHESEKLLTNLRASLMEREFSDYKKMGNHLNQFMGSSSSIGAKRVRNVCVAFRAAAEQNNRAGCLRALEMLEHEYCYLKNKLHELFQIEQQRALAAGVRYPVQD 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00093 156 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 11 143 IPR045871 GO:0000160|GO:0009927|GO:0043424
Vian9g00093 156 FunFam Histidine-containing phosphotransfer protein 1 4 153 - -
Vian9g00093 156 Pfam Hpt domain 47 116 IPR008207 GO:0000160
Vian9g00093 156 Gene3D HPT domain 4 156 IPR036641 GO:0000160
Vian9g00093 156 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 41 137 IPR008207 GO:0000160
Vian9g00093 156 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 9 143 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00093 Vian-Chr9 748689 749817 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00093 K14490 - gmx:100789608 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00093 9 748689 749817 Vian9g00093 9 748689 749817 ECH
Vian11g00083 11 735540 736388 Vian9g00093 9 748689 749817 PCT