Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00083 ATGCTTGGTTTCGGTGCGGACCTCTTGTGGGCCGACATGAACCGTCTTCTTGCTTTTCTTTTCCACCAGGGAGTGTTGGATGAGCAATTTTTGCAGCTTCAACAGCTTCAAGATGAGGCCTCCCCAAACTTCGTCTCTGAGGTTGTCAACATTTATTTTCACGAATCCGAGAAGCTGCTCAACAATCTCAGAGGATTGCTAATGGAAAGGGAGTTATCAGATTACAAGAAAATGGGAATCCATTTGAATCAGTTCATGGGAAGCAGCTCAAGCATCGGTGCCAAGAGAGTCACAAACATTTGCGTTGCCTTTCGTGCTGCTACAGACCAGAGCAACCGTGCAGGATGCTTGCGAGCGTTGGAGATGCTGGAGCATGAATACTGCTATCTCAAGAACAAGTTGCATGAATTGTTCCAAGTAAGTTGCATTGCATTCGAAGGTTTTAATGCTACGACTGAGATTTGA 465 0.4559 MLGFGADLLWADMNRLLAFLFHQGVLDEQFLQLQQLQDEASPNFVSEVVNIYFHESEKLLNNLRGLLMERELSDYKKMGIHLNQFMGSSSSIGAKRVTNICVAFRAATDQSNRAGCLRALEMLEHEYCYLKNKLHELFQVSCIAFEGFNATTEI 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00083 154 Gene3D HPT domain 5 153 IPR036641 GO:0000160
Vian11g00083 154 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 41 137 IPR008207 GO:0000160
Vian11g00083 154 FunFam Histidine-containing phosphotransfer protein 1 4 148 - -
Vian11g00083 154 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 9 139 IPR036641 GO:0000160
Vian11g00083 154 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 11 140 IPR045871 GO:0000160|GO:0009927|GO:0043424
Vian11g00083 154 Pfam Hpt domain 47 118 IPR008207 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00083 Vian-Chr11 735540 736388 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00083 K14490 - gmx:100814937 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00083 11 735540 736388 Vian11g00083 11 735540 736388 ECH
Vian11g00083 11 735540 736388 Vian9g00093 9 748689 749817 PCT