Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00087 ATGTCTGCTGCTGTGTGCGGAAGCAAGAGATCTTTCTTCGAAGAGCTTCCTCCTTCTCCACCACTCTCCAAGAGGCTCCGTTGTTCCTCTTCGCCGATTCGCTTCCCTCCCCTCTCTCTCATCGACCAACTTCGCCCGCTCTTTCCGCACATGGACGACCTGGTTCTTGAGAGGGCTCTTCAGGAATGTGGAAATGATATTGATGCTGCCATCAAGAGGCTGAACGAGCTTTGCTTGGGAAAAACAGATGGAAATGAAAATTCGGAAGGATTGGATGTTGTTAATTTGGTTGCAGGTAAATTGGAAGACAATGGAAATGCTTCTGTTCCTGAGGACCAGCCTACTTTGAACAACCACCTTCCTGCAGATGGACCAGAATGGATTGACTTTTTTGTTAGGGAAATGATGGTTGCTACTAGTGTTGATGATGCTAGAGCCCGTGCTGCTAGAATGCTAGAAGTTCTAGAGAAATCAATCAGTGAAAGAGCAAGGGCTGAGGCAACTGATGCACTTCAAAAGGAAAATTTGATGCTGAAAGAGCAAATCGAAGCATTGATTAAGGAGAAAAATTCTTTCAAAAATGCTTTTAGAATCCAGCACGAACGATCTGCTGATTACGAGGTTAAGAACCAAGAGTTGCAGCATTTAAAGCAATTGGTGTCTCAATACCAGGAGCAGATTAGAACTCTCGAGGTGAATAACTATGCTTTGGCAATGCATTTGAAGCAGGCTCAACAGAGCAACCCCTTTACTGGGCATTTCCCACCTGATATCTTCTAA 780 0.4474 MSAAVCGSKRSFFEELPPSPPLSKRLRCSSSPIRFPPLSLIDQLRPLFPHMDDLVLERALQECGNDIDAAIKRLNELCLGKTDGNENSEGLDVVNLVAGKLEDNGNASVPEDQPTLNNHLPADGPEWIDFFVREMMVATSVDDARARAARMLEVLEKSISERARAEATDALQKENLMLKEQIEALIKEKNSFKNAFRIQHERSADYEVKNQELQHLKQLVSQYQEQIRTLEVNNYALAMHLKQAQQSNPFTGHFPPDIF 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00087 259 CDD CUE 39 74 - -
Vian9g00087 259 ProSiteProfiles CUE domain profile. 36 82 IPR003892 GO:0043130
Vian9g00087 259 Pfam CUE domain 40 76 IPR003892 GO:0043130
Vian9g00087 259 SUPERFAMILY UBA-like 40 82 IPR009060 GO:0005515
Vian9g00087 259 Gene3D - 39 80 - -
Vian9g00087 259 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 259 - -
Vian9g00087 259 Coils Coil 168 195 - -
Vian9g00087 259 Coils Coil 206 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00087 Vian-Chr9 714481 717898 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00087 - - gmx:100813137 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00087 9 714481 717898 Vian9g00087 9 714481 717898 ECH
Vian11g00078 11 699445 701335 Vian9g00087 9 714481 717898 PCT