Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00078 ATGTCTGCTGCGGTGTGCGGAAGCAAGAGATCTTTGTTCGAAGAGCTTCCACCTTCCCCGCCAGTATCCAAGAGGCTCCGCTGTTCATCTTCCCCAATTCGCCTCTCTCTTCCTTCCCTCATCGATCACCTTCGCCCTCTCTTCCCTCATATGGATGATCAGATCCTCGAGAAAGCCCTCCAAGAATGTGGTAATGACCTAGATGCTGCCATCAAGAGCCTCCACGGCCTCCGTCTGGGATCTACCGATGATAATTCTCAAGCTGCTCCTCAACCCCACCCTGACACAGGAGCTTTGGAAGAGAATGGGGATGCTGCATCTGCTTCTGGGGGTCAGCCGGCTGCAGACAACTTTCCTGCTGATGGAGCTGAGTGGATTGACTTGTTTGTCAGAGAGATGACATGTGCTACCAGCGTTGATGATGCCAGAGCTCGAGCTGCTAGACTGCTAGAGGTTTTAGAAAAATCTATTAGTGCACACGCCAGTTCTGGGGCAACAACTGCCCTTCAAAGGGAAAATTTGATGCTGAAGGAGCAAATTGAAGCCCTGACTAAGGAGAAAAATTGTTTTAAAAGTGCTTTTAGAATCCAGCTTGAACGCCTTTCGGATTACGATAGTAAAACCCAAGAGTTGCAGCAGTTGAAGCAGTTGGTGTCTCAATATCAGGAGCAGATCAGAACTCTTGAGGTGAATAACTATGCTTTGCGGATGCATTTGAATCAGGCACAACAGTACAACTCTTTTCCTGGGCGTTTCCCTCCTGATGCCTTCTAG 774 0.4897 MSAAVCGSKRSLFEELPPSPPVSKRLRCSSSPIRLSLPSLIDHLRPLFPHMDDQILEKALQECGNDLDAAIKSLHGLRLGSTDDNSQAAPQPHPDTGALEENGDAASASGGQPAADNFPADGAEWIDLFVREMTCATSVDDARARAARLLEVLEKSISAHASSGATTALQRENLMLKEQIEALTKEKNCFKSAFRIQLERLSDYDSKTQELQQLKQLVSQYQEQIRTLEVNNYALRMHLNQAQQYNSFPGRFPPDAF 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00078 257 CDD CUE 39 74 - -
Vian11g00078 257 ProSiteProfiles CUE domain profile. 36 79 IPR003892 GO:0043130
Vian11g00078 257 Coils Coil 166 186 - -
Vian11g00078 257 MobiDBLite consensus disorder prediction 81 117 - -
Vian11g00078 257 SUPERFAMILY UBA-like 37 83 IPR009060 GO:0005515
Vian11g00078 257 Coils Coil 204 231 - -
Vian11g00078 257 Gene3D - 29 84 - -
Vian11g00078 257 Pfam CUE domain 39 73 IPR003892 GO:0043130
Vian11g00078 257 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00078 Vian-Chr11 699445 701335 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00078 - - vum:124832196 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00078 11 699445 701335 Vian11g00078 11 699445 701335 ECH
Vian11g00078 11 699445 701335 Vian9g00087 9 714481 717898 PCT