Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01511 ATGATGCAACGGCTGGTTGATCATGTTCTTGCTATAACTAAAGAGTCCGTGAAGGCATTTACTTATGAGTCCTTAAACAATATTGTGAGGCTAATCAATGGAATATCTGCCCTTTTGTTGGCATGCCTACCTGGGAAAGCTAATATACTTGAAGGTATCCATGGTTGGGAACTCAGGCCAACTTTCCGTGGACCACGATTTCCGCGGTGGATGGAGAATGGTGTATCCTCTTTCAATCAGTTTGTCCATGATTTTTCTATGGATTCTGACAATTCAAGCCTTGAATACTCGTCCGAAGACGACGATAGTGAAATATATAGTGATGGACTTGAATACCCTCCAACTCCTGCATCTCAGAGTTCTAGAACATCAGAAGCTGGTATTACCAAATTCAGTAGGCATCAGAAGGATTGGATCCAATTCATCTTACTTTCAATTTTGTTTCCTTTAAAGTTATTGGTGTGGATTCCAGTTAACCTTTTTCGGTTAGTTTATTATGGGGTGTCAAAAGCCATGTCTTTCACCACAAATAAGCGTCCTCCTCATTTACGTGCACACAAGAGAGTGCTGAGTCTCAAGGATCATATTATCCACCGTGCTACTGATAGGAGACGAGGAGTTGTAGAGGATCTTCATCTAGGCATCGAGTTATCTATAGAAGCCGTGTTTGATGTTGTTCACAAGGCAGCACATCTTCTTCTTTCCCCTTCAGAAGCTTTTGGGGCATTAGTCAGGCTGTTTTCGTCTCATGAAAGTGCTGTTAAAGGAGATCCTGATGGTGAAGAGGACGCCTCCATATATACAGATACATTAGGAGAAAATGACCCAAAACCCAAAGAGAGAACTCTCAAGTATCAGCCTCTGAATACAGATGCTCGGACATGTCAGGATGTCATAACGGACCTTGGGTATCCATATGAAGCCATTCGTGTGATCACCTCTGATGGATATATTCTTCTTTTAGAAAGAATACCCAGGCGAGATTCAAGAAAAGCTGTTTATCTCCAGCATGGGGTTTTGGATTCATCAATGGGTTGGGTATCTAATGGAATTGTTGGCTCTCCAGCTTTTGCAGCATACGATCAAGGTTATGATGTATTTCTGGGGAATTTTCGTGGTTTGGTTTCACGGGAACATGTCAACGAGAACATATCATCACGTCAATATTGGCGGTATTCCATCAATGAGCATGGGACTGAGGATATTCCAGCTATGATAGAAAAAATCCATGAAGTAAAGACTGCTGAATTGAGGCTTACTAAACCTGATATAGAGGAGGAAACTGATGACGATCAGCCGTACAAGCTTTGTGCCATTTGCCATAGTTTGGGAGGAGCTGCTGTGCTGATGTATGTTATTACTCGAAGGATAGAAGGGAAACCCCATAGGCTTTCAAGATTGGTTTTGTTATCACCAGCCGGTTTTCACGAGGACTCTAACATTGTTTTTTCTGTGGCTGAACTTCTACTGGTTTTACTGGCTCCTGTTTTGTCTCTTCTTGTTCCTGCCTTCTATATACCAACCAGATTTTTTCGTATGCTTGTCAACAAGTTAGCGAGGGATCTGCATAACCTACCTGCAGTTGGAGGGTTGGTTCAAACTTTAATGAGCTATGTTGTTGGTGGAGACAGTTCAAACTGGGTTGGAGTTTTAGGATTACCACACTATAACATGAATGACATGCCAGGAGTAGCTTTTCGTGTTGCTCTCCATCTTTCACAGATGAAGCGCACTGGAAAATTCATAATGTTTGATTATGGTAGTACTTCTGCCAACATGGAAGTGTATGGTTCACCTGTGCCTTTGGACTTGGGTGAACGCTATGAACTCATAGACATTCCTGTTAATCTTGTTGCTGGACAGAAGGACAAAGTGATAAGGCCTTCAATGGTGAAGAGACACTATAAATTGATGAAGGGTGCTGGGGTAGATGTTTCATATAATGAGTTTGAATATGCACACCTGGACTTCACCTTTTCCCACCATGAAGAACTCTTGTCATTTGTTATGTCATGCTTGCTGCTTGTGGATCCTAATGCAAAACATCAAGTGAATCAAAGGGGTGTAAGGTCAAGAAGAAAAGGGCAAGTTGCAACCAGTGGTTAG 2106 0.4202 MMQRLVDHVLAITKESVKAFTYESLNNIVRLINGISALLLACLPGKANILEGIHGWELRPTFRGPRFPRWMENGVSSFNQFVHDFSMDSDNSSLEYSSEDDDSEIYSDGLEYPPTPASQSSRTSEAGITKFSRHQKDWIQFILLSILFPLKLLVWIPVNLFRLVYYGVSKAMSFTTNKRPPHLRAHKRVLSLKDHIIHRATDRRRGVVEDLHLGIELSIEAVFDVVHKAAHLLLSPSEAFGALVRLFSSHESAVKGDPDGEEDASIYTDTLGENDPKPKERTLKYQPLNTDARTCQDVITDLGYPYEAIRVITSDGYILLLERIPRRDSRKAVYLQHGVLDSSMGWVSNGIVGSPAFAAYDQGYDVFLGNFRGLVSREHVNENISSRQYWRYSINEHGTEDIPAMIEKIHEVKTAELRLTKPDIEEETDDDQPYKLCAICHSLGGAAVLMYVITRRIEGKPHRLSRLVLLSPAGFHEDSNIVFSVAELLLVLLAPVLSLLVPAFYIPTRFFRMLVNKLARDLHNLPAVGGLVQTLMSYVVGGDSSNWVGVLGLPHYNMNDMPGVAFRVALHLSQMKRTGKFIMFDYGSTSANMEVYGSPVPLDLGERYELIDIPVNLVAGQKDKVIRPSMVKRHYKLMKGAGVDVSYNEFEYAHLDFTFSHHEELLSFVMSCLLLVDPNAKHQVNQRGVRSRRKGQVATSG 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01511 701 PANTHER LYSOSOMAL ACID LIPASE-RELATED 214 664 - -
Vian8g01511 701 MobiDBLite consensus disorder prediction 92 126 - -
Vian8g01511 701 SUPERFAMILY alpha/beta-Hydrolases 293 668 IPR029058 -
Vian8g01511 701 Gene3D alpha/beta hydrolase 285 673 IPR029058 -
Vian8g01511 701 MobiDBLite consensus disorder prediction 254 278 - -
Vian8g01511 701 FunFam Gastric triacylglycerol lipase 284 674 - -
Vian8g01511 701 Pfam Partial alpha/beta-hydrolase lipase region 296 350 IPR006693 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01511 Vian-Chr8 34592086 34597109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01511 2 685 Lipid Metabolism Gene Families AT1G18460 67.587 0.0 927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01511 - - gmx:100785512 1210.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01511 8 34592086 34597109 Vian8g01511 8 34592086 34597109 ECH
Vian1g04071 1 63773286 63777108 Vian8g01511 8 34592086 34597109 PCT