Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04071 ATGGAGACGAATCACTCAGTCACAATCAGAAGCGCCACGTGGAATCTGAGACAGGGACGGTTTAATGCGCTCACCGACTTAACCTCCTCCAAAGTTTCCCTCGCAACCCAAGAAACGAATGGAATCGGTTCTCTCTTTCTCTCTGTTTCGCTTTCGCTTTCTCTTTCTTCTTCGCTTCGCTGCATTGCCATTATTCTCAAATTCTCTATTTCAAACCAACCATTCAGAATGCAACGTTTTGTTGACGACGTCCTCGCTGTTACTAAAGAGTCGGTGAAGACGTTTACTTATGAGTCGTTGAACATTATTGTGAGACTGATCAACGGTGTCTCAGCTCTGGTGTTGGCACTGCTACCTGGGAAAGCTAATATACTTGAAGGTATTCAGGGTTGGGAGCTCCGGCCAACTTTTCGTGGACCACGCTTTCCACGTTGGATGGAAAAAGTCCCCAGAGCTACTTTTGCTGATTACGGTAGACAGCAGACGGATTGGATATTGATTCCTCTACAGTTCTTGATGGGTCTTCCATTTCGTCTTTTCCAATTAGTTTATTCTAGGGTGTCAAAACCACGATCTATCTCTGGTTGTCAACACCCTTCACAACCACATTCACCCAATGGAGTGCAAAGCCTCAAGGATCAAATTATTCATCGGGCCACTGATAGGAGACGTGGGGTCATAGAGGATCTTCATTTGGCCATGGAGATATTTATAGAGGCTGTTTTTGATGTTATTCACAAGTCTATACATGTTCTTTTTTCCCCATCAGAAGCTCTTGGAACTTTATTCAGGTTCTTCTCATCTCATGAAAGGCCCATTTTAGCTGATAATGATGTTGTAGAGGATGCCTCTGTTTCTTCAGCACCTGCAGAAAGGAATACCAGTTTTCGTTCGTCTCTGAACACAGATGCCCGGACATGTCAAGATGTTATAACAGAGCTAGGGTACCCATATGAAGCTATTCGTGTGATCACTGCCGATGGATACGTTCTTCTTCTAGAAAGAATTCCTAGGCGAGATGCACGTAAAGTTGTTTATCTTCAGCATGGAATCTTTGATTCATCAATGGGTTATGATATTGGCATAACATATAGGACTGAAGAGCTTTTCTGTTTAGATTTTACCCTGCCTCCTCTGTTCTGTACCAGATTCCCTCCCTCTGAATCTTGGATATCTAACGGTGTTGTTGGCTCTCCCGCCTTTGCAGCCTATGATCAAGGCTTTGATGTATTTCTGGGAAATATTCGTGGCCTGGTTTCTAGGGAACATGTCAACAAGAATATCTCCTCCCGTGAATACTGGAAGTATTCCATCAATGAATATGGGACGAAGGATATTCCTGCTTTGATTGAGAAAATCCATCAAGTAAAAATGGCTGAATTGAGGCTTAGTAAGCCTGATATTGAGGAGGAAAGTAATGACGATCAGCTTTACAAGCTCTGTGCAATTTGCCATAGTTTGGGAGGAGCTGCTATGTTAATGTATGTTGTTACGCGTAGGTTAAAATCAAAGCCCCATAGACTTTCACGATTGGTTTTGTTATCACCTGCTGGTTTTCATCATGACTCAAGCGTACTCTTTTCTGCGGTGGAGCATGTGTTGTTTTTCCTGGGCCCTATTTTATCTCGTATATTCCCAGCCTTCTATGTACCAACAAGGTTTTTCCGTATGCTTGTTAACAAGTTAGCTAGGGACCTGCAACACCTACCTGCAGTTGGAGGATTGGTTCAAACTTTAGTAGCTTATGTTGCTGGCGGGGACAGCTCAAATTGGGTTGGGGTTTTAGGATTACCCCATTACAACATGAATGATATGCCAGGAGTATCGTTTGGTGTTGCTCTCCATCTTGCACAGATGAAACGTACTAGAAGATTTAGAATGTTTGATTATGGGAGTGCATATAATATGAAAATATATGGTTCCCTTGAGCCTTTGGACTTGGGTGAACATTATGGACTCATCGACATTCCTGTTGATCTGGTTGCTGGTCAGAGAGACACGGTAATACGATCTTCAATGGTAAAGAGACACTATAAATTGATGAAGGATGCTGGTGTGGATGTGTCATATAATGAATTTGAATATGCTCATTTGGATTTTACCTTCTCTCACCGTGAAGAGCTTTTGTCATATGTTATGTCAAGTTTGCTGCTTGTGAAGCCCAATTCAAAGAAACATCAAAGGGCTCCAAGATCGAGAAGGAAAGGACACACTTCAATAAGTGGGTAA 2229 0.4253 METNHSVTIRSATWNLRQGRFNALTDLTSSKVSLATQETNGIGSLFLSVSLSLSLSSSLRCIAIILKFSISNQPFRMQRFVDDVLAVTKESVKTFTYESLNIIVRLINGVSALVLALLPGKANILEGIQGWELRPTFRGPRFPRWMEKVPRATFADYGRQQTDWILIPLQFLMGLPFRLFQLVYSRVSKPRSISGCQHPSQPHSPNGVQSLKDQIIHRATDRRRGVIEDLHLAMEIFIEAVFDVIHKSIHVLFSPSEALGTLFRFFSSHERPILADNDVVEDASVSSAPAERNTSFRSSLNTDARTCQDVITELGYPYEAIRVITADGYVLLLERIPRRDARKVVYLQHGIFDSSMGYDIGITYRTEELFCLDFTLPPLFCTRFPPSESWISNGVVGSPAFAAYDQGFDVFLGNIRGLVSREHVNKNISSREYWKYSINEYGTKDIPALIEKIHQVKMAELRLSKPDIEEESNDDQLYKLCAICHSLGGAAMLMYVVTRRLKSKPHRLSRLVLLSPAGFHHDSSVLFSAVEHVLFFLGPILSRIFPAFYVPTRFFRMLVNKLARDLQHLPAVGGLVQTLVAYVAGGDSSNWVGVLGLPHYNMNDMPGVSFGVALHLAQMKRTRRFRMFDYGSAYNMKIYGSLEPLDLGEHYGLIDIPVDLVAGQRDTVIRSSMVKRHYKLMKDAGVDVSYNEFEYAHLDFTFSHREELLSYVMSSLLLVKPNSKKHQRAPRSRRKGHTSISG 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04071 742 FunFam Gastric triacylglycerol lipase 383 717 - -
Vian1g04071 742 MobiDBLite consensus disorder prediction 723 742 - -
Vian1g04071 742 SUPERFAMILY alpha/beta-Hydrolases 306 709 IPR029058 -
Vian1g04071 742 PANTHER LYSOSOMAL ACID LIPASE-RELATED 246 716 - -
Vian1g04071 742 Pfam Partial alpha/beta-hydrolase lipase region 308 356 IPR006693 GO:0006629
Vian1g04071 742 Gene3D alpha/beta hydrolase 296 716 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04071 Vian-Chr1 63773286 63777108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g04071 77 725 Lipid Metabolism Gene Families AT1G18460 56.723 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04071 - - pvu:PHAVU_002G315000g 1024.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04071 1 63773286 63777108 Vian1g04071 1 63773286 63777108 ECH
Vian1g04071 1 63773286 63777108 Vian8g01511 8 34592086 34597109 PCT