Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01496 ATGATGAGTTCGGCGGCGAGGGTGCCCAAGTTGGGCTCCTTCCGTCACAGCTTCGCCGAGAAGAAAGAGAGGCTGCTCTCCATGAAGGGTGGAGGTTACTCCCAAATTGGGATCGCTCTGCCGGAGTCCGACGAGGAGGACAACTCGCCGCGGAGGCGATGCTGCTCATACCGCGCTGTCTCCGACGGGATCATCGGCGTGTGGAAGAGCACGAAGCGCGTGACGGCGCGAGCATGGGAGATGGGGATGTCTGATCCCAGGAAGATCATATTCTCCGCAAAAATGGGACTCGCTCTCATTCTCCTTTCTCTTCTGATTTTCCTCAAAAAGCCCTTTGAGGACGTTAGTCGATACTCTGTTTGGGCTATTCTCACTGTCGTTGTGGTCTTCGAATTCAGCATAGGGGCAACTCTTAGCAAAGGACTTAACAGAGGACTGGGGACTTTGTTAGCTGGAGGTCTAGCTTTGGGAATGGGAATCTTATCACAGTTGGCTGGAAAATGGGAAGAGCTCATCATAACTGTTAGCATCTTCACTGTAGGATTTTGTGCCACATATGCAAAACAATATCCAACAATGAAGGCTTATGAATATGGTTTCCGTGTGTTCTTGATCACCTATTGCTACATTATTGTATCAGGGTATCGAACAGGAGAGTTTGTTCAAACAGCTATAAATAGATTTTTGCTCATTGCACTTGGTGCTGCTGTCGCACTCGGGATAAATGTATGCATATATCCAATATGGGCCGGTGAGGATCTGCATAATCTTGTGGCAAAAAATTTCGTGGGCGTTGCTGCATCATTGGAAGGCGTTGTTAATAACTATCTTAATTGTGTTGAATACGAGAGAGTGCCTTCTAAAATTCTTACATACCAAGCTGCTGAGGATGTGGTTTACAAAGGCTATAGATCAGCTGTTGAATCTACAAGCACAGAGGATTCATTGATGGGTTTTGCTGTATGGGAGCCACCTCATGGAAGATATAAAATGCTTAGATATCCATGGCAAAATTATGTGAAAGTAAGTGGGGCTCTAAGGCATTGTGCATTTATGGTCATGGCTATGCATGGATGTATACTTTCTGAAATACAGGCACCACCAGAGAAGAGACAAGTCTTTAGAAGGGAGCTTCAGAAGGTGGGTTCTGAAGGGGCAAAAATTCTAAGGGATCTCGGAAACAAAGTAAAAAAAATGGAGAAACTAGGCGAGGAAGACATTCTTTACGAAGTACACGAGGCAGCAGAAGAATTGCAGCAGAAAATTGACAAAAAGTCCTTCCTCCTTGTGAATTCAGAGAGCTGGGAAATCGGAAACCGGCCAAGAGGGGAGGGTGATCCTCAAGATCTCTTGAACGTGGATGAAGAAAGACACTTTTTGGAGTACAAGTCTCTAAGTGAAGCTGTGCTTGATCTCAGAGCTGTCAAAGTTCCAAAAGGTTGGGGAGAACAAGCAGCTCCTGAGAAGAAACCTGCAGTGCCTGTAGGTGTTGGTGATGAAAACATGTTCAGGAAACAGATATCTTGGCCTGCTCATATTTCCTTCACAGCAGATGCAGTGACAAAAGAGGAAGAATCTAAAACGTATGAAAGTGCTAGTTCTTTGTCTCTAGCCACTTTTACATCCCTTCTGATCGAGTTTGTGGCAAGGCTCCAGAACCTTGTAGATTCTTTCGAAGAGTTAGGCGAGAGAGCAAAATTTAAGGACCCTCTTGAGCAAGCACCAACAACAACTGGAGGGTTTTGGAACCGGTTGTGTAATGTTTTGACGGTCAAGGATTGA 1782 0.4551 MMSSAARVPKLGSFRHSFAEKKERLLSMKGGGYSQIGIALPESDEEDNSPRRRCCSYRAVSDGIIGVWKSTKRVTARAWEMGMSDPRKIIFSAKMGLALILLSLLIFLKKPFEDVSRYSVWAILTVVVVFEFSIGATLSKGLNRGLGTLLAGGLALGMGILSQLAGKWEELIITVSIFTVGFCATYAKQYPTMKAYEYGFRVFLITYCYIIVSGYRTGEFVQTAINRFLLIALGAAVALGINVCIYPIWAGEDLHNLVAKNFVGVAASLEGVVNNYLNCVEYERVPSKILTYQAAEDVVYKGYRSAVESTSTEDSLMGFAVWEPPHGRYKMLRYPWQNYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFRRELQKVGSEGAKILRDLGNKVKKMEKLGEEDILYEVHEAAEELQQKIDKKSFLLVNSESWEIGNRPRGEGDPQDLLNVDEERHFLEYKSLSEAVLDLRAVKVPKGWGEQAAPEKKPAVPVGVGDENMFRKQISWPAHISFTADAVTKEEESKTYESASSLSLATFTSLLIEFVARLQNLVDSFEELGERAKFKDPLEQAPTTTGGFWNRLCNVLTVKD 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01496 593 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 64 573 - -
Vian8g01496 593 Pfam Aluminium activated malate transporter 79 562 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01496 Vian-Chr8 34440628 34446279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01496 10 570 Miscellaneous Gene Families AT3G18440 64.028 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01496 K25841 - gmx:100810157 1043.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01496 8 34440628 34446279 Vian8g01496 8 34440628 34446279 ECH
Vian1g04078 1 63856097 63858478 Vian8g01496 8 34440628 34446279 PCT