Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04078 ATGGCTCCGAAATTGGTGAAATCGGGGTCGTTCCGTCACGGTTTGGCGGAGAAGAAGGAGAGGCTTCTCTCGGGGAAGAGTAGTAGTGATATCTCTCAGATAGGGATTGGCATGGTGATGCAAGAGGAAGAGCAATCGAGGATGTTGAAGTGGTGGAGCACGGTTAAGCGTGTAACTGGGAAAGCATTGGAAATGGGTCGGTCTGATCCAAGAAAGATCATCTTTTCTGCAAAAACGGGTCTTGCTTTGACCCTTCTTTCATTTTTGATTTTCCTCAAAGAACCCTTCAAGGACATGAGTCTTTACTGTGTCTGGGCCATTCTTACTGTCGTCGTAGTCTTCGAATTCAGCATAGGGGCAACTCTGAGCAAGAGCTTAAATGGTGGATTGGGGACCTTGTTGGCTGGAGCACTTTCATTGGGAATGGCAGAGTTATCAACATTGGCTGGAAAATGGGAGCAGCTAATAATCATTATATGCATCTTCATTGTAGGGTTTTCTGCCACATACACAAAACTATACCCTTCTTTCAAGCCTTATGAATACGGGTTCCGCGTGTTCTTGATCACGTACTGTTTCATTACTGTATCCGGGTATCAAACAGGGGAATTTGTTGATACTGCTATAAATAGATTTGTCCTCATTGCACTCGGTGCTGCTGTCTCTTTGGTAGTAAATATCTGTATATACCCTATCTGGGCTGGAGAGGATCTGCATAATCTTGTCATAAAAAATTTCATGGATCTTGCAACATCTTTGGAAGGTGTTGTCAGTAGCTACCTTCATTGTGTTGAATATAAGAAGGTGCCGTCTAAAATTCTTACTTACCAAGCTGCTGAGGATCCAATTTACAATGGGTACAGATCGGTTGTTGAATCGACAAGTAAAGAAGATACATTGATGGGTTTTGCTGTGTGGGAACCACCACATGGTCATTACAAAATGCATAAATATCCATGGAAGAATTATGTGAAATTAAGCGGGTCTCTAAGGCATTGCGCATTTATGGTCATGGCTATGCATGGATGCATACTTTCTGAAATACAGGCCCCAGCTGAGAAGAGACAGGTTTTCCGTGGCGAGCTTCAAAGGGTAGGTTGTGAAGGGGCGAAAGTGTTACGTGAACTTGGAAACAAAGTTCAAAAGATGGAGAAACTAGACCGGGAAGACTTGCTGGATGAAGTGCACGACGCAGCAGAGGAACTGCAAAAGAAGATTGATAAAAAATCATACCTTCTTGTGAATTCAGAGAGCTGGGAAATTGGAAACCGACCAATCGAGGACACAGGCGAAGAAGGAGAAATTCTTGAGCACAAGTCTCGAAGTGAAGCAGTGCTTGACCTGAGAACAGTTGAAGTTGCACATTCGTGGGATGGAAATTTAACTCTGGGCAATAACCATGTTGTGCCTGCGACCGATGCCTCTCAAAACATGTCCAGGAAACAGACATCTTTGCCTGCTCATATATATCATCAAAAATCAAATGCCGAGATCAAAGAGGGTCAACAACTGAAAACTTTCGAAAGTGCTAGTGCCCTATCTCTAACAACATTTTCATCGCTTCTGATTGAATTTGTGGCAAGGCTTCAAAACTTGGTGGATTCATTTGAAGAACTAGGTGAAACAGCAAACTTTTCTGACCCTCTTGAGCAACGAGAGCCATTAAAATCTCATGGCTTTTGGACCAGGTTGTTTAACTGCTCGTAA 1707 0.4318 MAPKLVKSGSFRHGLAEKKERLLSGKSSSDISQIGIGMVMQEEEQSRMLKWWSTVKRVTGKALEMGRSDPRKIIFSAKTGLALTLLSFLIFLKEPFKDMSLYCVWAILTVVVVFEFSIGATLSKSLNGGLGTLLAGALSLGMAELSTLAGKWEQLIIIICIFIVGFSATYTKLYPSFKPYEYGFRVFLITYCFITVSGYQTGEFVDTAINRFVLIALGAAVSLVVNICIYPIWAGEDLHNLVIKNFMDLATSLEGVVSSYLHCVEYKKVPSKILTYQAAEDPIYNGYRSVVESTSKEDTLMGFAVWEPPHGHYKMHKYPWKNYVKLSGSLRHCAFMVMAMHGCILSEIQAPAEKRQVFRGELQRVGCEGAKVLRELGNKVQKMEKLDREDLLDEVHDAAEELQKKIDKKSYLLVNSESWEIGNRPIEDTGEEGEILEHKSRSEAVLDLRTVEVAHSWDGNLTLGNNHVVPATDASQNMSRKQTSLPAHIYHQKSNAEIKEGQQLKTFESASALSLTTFSSLLIEFVARLQNLVDSFEELGETANFSDPLEQREPLKSHGFWTRLFNCS 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04078 568 Pfam Aluminium activated malate transporter 64 540 IPR020966 GO:0015743
Vian1g04078 568 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 44 551 - -
Vian1g04078 568 Coils Coil 388 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04078 Vian-Chr1 63856097 63858478 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g04078 7 548 Miscellaneous Gene Families AT3G18440 59.445 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04078 K25841 - gmx:100813638 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04078 1 63856097 63858478 Vian8g01496 8 34440628 34446279 PCT