Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01480 ATGCCATGTTCCAAAGAAGAAGCTCTTGTTAGACTCTTCTACAATGTCTCTAGCTCCTTCCACCTTCTCTTTCTCCTCCTCTTCTCTTCTTCCCTTTTGCTTATCAACTTCTTGAACTTCATTGCCAGCTTCACCATCTTCCAAAGAGATCACCACTATGAGTATGTGTCTTCTGAGTACGATGAAGAAGAAGAAGAAGAAGAAGAAATTCAAGAAAGATACTCTTATGAGCATGATTCTGGTGAGTCAGATCACCTGGTAGCTGACATCATTGGTGGTGGAGAAACCCTTTTGTTTGTGCACAACGACCAGCCTCTGAGGACTCATTCTTCTTCTGATGAATTCACAAGCCCCCGTGATAGCCTTGTTGAAGAAGAGTTAGAAGAAAACTATTCAACAGAAACCTTGTCTTTTCACAAGTCACCTGTGGTCTCAGACATAGAAAATGTACAAGAGGTAGAAGAATTTCCAGCTGAAGATGCTGATTCTGTTCCAAATTCTGTCCCTGATGAAAGCAGGCCCACATCGCCCATCACCCTGAACCTCTACAAAAGTGACTCACCAGACAGTGACAAAAACTGTGACGAAGATCGTGTTGGAATTGGAATTGTTGAAAATAAGAAGCTGCAAGAGGAAAGCCTCACACGAGATGAGAGATTCTTGGTCTATGATCGTACCCAATTGGAGGCCAAGAAGCTCATTGTTCAGGAAAAGGATGATGAAGAAATATTCGGTGACTCATGCACTGTTGGATCCACTTCTAAGAGTTCCTCTGAGTGGAGGAGCTCTATTAACTGCAGAGATTCTGGAACTGATGACCCTTTTTCTTCCTCATCAAGAAGAAGTTGTCCCAAGTGGGAATCATACACAGTTTTCCAAAAGTATGATGAAGAAATGTCATTCCAAGATAGAATTAGTGCACAGAAACTTCAAGAAATTGAATCTTTAAGGTCTATCAAGGTATCTCCAAGGTCAATTTCAGAGCGCATTGTGTTCAAGTTTTCAAGTATGAACAAGAAACCAAATGATACACGTAACAACCCATATCATGAACTTGAGGCAGCATATGTTGCACAAATTTGCTCAACATGGGAAGCTCTTAATTGGAACTACAAGAATTTTCAATCCAAGCGAGCTTCACGAAGTCATGATGTTGATGTGGGTTGTCCAGCCACCATTGCACAGAGATTACAACAATTTCAAGTGTTGTTGCAGAGATACATAGAAACCGAGCCTTATGAGCATGGTAGAAGACCAGAGATCTATGCTAGAGTGAGGAATTTAGCTCCAAAATTGCTACTAGTACCAGAATATCGAGAATCAGAAGATGATGAGAGAGAAGAAAACGGTGTTCAGTCAAAAATATCATCAGCTTCATTTCTTACGATAATGGAAGATGGGATCAGAACATTCATGAGTTTTCTGAAGGCTGATAAAGAGAAACCAAGTCAGATATTCGCAGCTTACTTTCGGAGAAACCGAAGACCCTTGGTTGATCCAACACTTCTACGCCTCATCAAGAAAGTTAATCAAAAGAAGAAGATGAAAGTGAAGGAGCTTGGACGTTCGAGAAAATGCTTGAGGAAGAGAAAGCTGAAGGGAGAAGAAGAGATGGAGATTTTGATGGCACTGATAGACCTGAAAGTGGTGTCAAGGGTTTTGAGAATGAGTGAGTTAAGTGAGGAACAGTTGCATTGGTGTGAAGAGAAGATGAGGAAAGTAAGAGTGGTGGAAGGAAAACTACAAAGAGATTCTTCTCCACTTTTTTTCCCTGCACATTGA 1782 0.4102 MPCSKEEALVRLFYNVSSSFHLLFLLLFSSSLLLINFLNFIASFTIFQRDHHYEYVSSEYDEEEEEEEEIQERYSYEHDSGESDHLVADIIGGGETLLFVHNDQPLRTHSSSDEFTSPRDSLVEEELEENYSTETLSFHKSPVVSDIENVQEVEEFPAEDADSVPNSVPDESRPTSPITLNLYKSDSPDSDKNCDEDRVGIGIVENKKLQEESLTRDERFLVYDRTQLEAKKLIVQEKDDEEIFGDSCTVGSTSKSSSEWRSSINCRDSGTDDPFSSSSRRSCPKWESYTVFQKYDEEMSFQDRISAQKLQEIESLRSIKVSPRSISERIVFKFSSMNKKPNDTRNNPYHELEAAYVAQICSTWEALNWNYKNFQSKRASRSHDVDVGCPATIAQRLQQFQVLLQRYIETEPYEHGRRPEIYARVRNLAPKLLLVPEYRESEDDEREENGVQSKISSASFLTIMEDGIRTFMSFLKADKEKPSQIFAAYFRRNRRPLVDPTLLRLIKKVNQKKKMKVKELGRSRKCLRKRKLKGEEEMEILMALIDLKVVSRVLRMSELSEEQLHWCEEKMRKVRVVEGKLQRDSSPLFFPAH 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01480 593 MobiDBLite consensus disorder prediction 253 282 - -
Vian8g01480 593 Pfam Protein of unknown function (DUF1666) 351 591 IPR012870 -
Vian8g01480 593 MobiDBLite consensus disorder prediction 168 187 - -
Vian8g01480 593 PANTHER DNA LIGASE (DUF1666)-RELATED 12 593 - -
Vian8g01480 593 Coils Coil 53 73 - -
Vian8g01480 593 MobiDBLite consensus disorder prediction 157 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01480 Vian-Chr8 34259442 34262127 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01480 - - gmx:100786564 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01480 8 34259442 34262127 Vian8g01480 8 34259442 34262127 ECH
Vian1g04085 1 63923273 63925628 Vian8g01480 8 34259442 34262127 PCT