Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04085 ATGCTGCTATGTCCCAAAGAAGATGCACTTCTTAAACTATTCTACAATGTCTCAAGCCCTCTTCACCTTCTCTTTCTCCTTCTCTTCTCCTCTGCCGTTTTCCTTCTTACCTTCTTCACCTTCTCAGGCAGATACCCCTTCATCCAAAGGGATCAAGAATATGAATATGTGTACACCGAGGATGAAGAAGAAGAAGATACTCAAGAAGGGTATTCTTGTGTTGATTCTACCGAGGGAGAAAACATCACTTGTGGGAAAGGAGTTCCTGTGTTTGTGTACAATGAGAGGCATCAAAGGACTCATTCTTATTCGGAAGAATTCGTAAGCCCCAGAGAGAGCTTGAATGAAGAGTCAGAAGAAAAACATTATTCTGAAACGTTGTCTCTCCATAAGTCTCCGCAAGTTTCTGACTTCGACAATGAAGGGGCAGAAACGGTCGAAGAAGACTTTACAGCAAGAGATTCTGATTCTGTTCCAAAATCTACCAAAGTTACCAAAGTTGAAAGCAGGAACACCTCCCCCTTCAACCTCAACGCGTACAAAGGAAAAAAACACCATGACGACGATCACGTTAGCGTTGAAATTATCAGAAACAAGAAGGTGCAAGAGCCAAACGCTGCTAGGGATGAGAGATTCTTTGTTTTTGCTTCTACCCAGTTGCAGAGTAAGAAGTTGATGGTTGAAGAGAAGGATGATGAGTCCTCTAAATGGAAGAGCTCCATCAATTGCAGGGATTCCGAGACTGAGGAGGATGCATTTTCTTCTTCATCCAGAAGAAGTTGCCCCAAGTGGGAATCATACACATTGTTCCAAAAATATGATGAAGAAATGGCAATCCTAGACAGAATTAGTGCACAGAAACTTCATGAAACAGAGTCATTAAGGTCCATCCAAATGTCTCCAAGATCAATGTCAGAGCGTATTGTGTACAAGTTTCAGACTATAAATAAAAAATCTGTTGATGTTGGTCACAATCCATATCGCGAACTAGAGGCTGCATACGTAGCACAAATTTGCTTGACATGGGAAGCCCTTAGTTGGAACTACAAAAATTTTCGTTCCAAACATGCCTCACGCCAGGACAATGACACGGGTTGTTCTGCCACAGTTGCTCAACAATTCCAGCAGTTTCAGGTTTTGTTACAGAGATACATTGAGAATGAGCCTTATGAGCACGGTAGGAGACCTGAAATCTATGCTAGAATGAGACTTTTGGCACCCAAATTGCTCCTAGTGCCAGAATATCAAGAGGAGGATCAGAAGGATGGTGGTTTTCAATGCAAAATATCATCAGCTTCATTTCTGAAGATAATGGAAGATGGGATCAAAACATTCATGAATTTTCTAAAGAATGACAAAGAGAAACCCTGTCAGATCCTTGCAGCCTACTTCAGGAGAAACCAAAGAGGCACAGTTGATCCAACACTACTGGGACTAATGAAGAAGGTTAACCAAAAGAAGAGGGTGAAGGTTAAAGATCTTAACCATGCAGGGAAATGCTTGAGGAAGAGAAAGTTAAAGGTGGAAAAGGATATGGATATTTTGATGGCTCTGACAGACCTAAAAGTTGTGTCAAGGGTTTTAAGAATGAGTGAATTGAGTGAAGAGCAGTTGCACTGGTGTGAAGAGAAGATGAGCAAAGTGAGAATCATGGAAGGGAAACTTCAGAGAGATTATTCCACACCACTTTTCTTCCCCTCACTTTGA 1707 0.4153 MLLCPKEDALLKLFYNVSSPLHLLFLLLFSSAVFLLTFFTFSGRYPFIQRDQEYEYVYTEDEEEEDTQEGYSCVDSTEGENITCGKGVPVFVYNERHQRTHSYSEEFVSPRESLNEESEEKHYSETLSLHKSPQVSDFDNEGAETVEEDFTARDSDSVPKSTKVTKVESRNTSPFNLNAYKGKKHHDDDHVSVEIIRNKKVQEPNAARDERFFVFASTQLQSKKLMVEEKDDESSKWKSSINCRDSETEEDAFSSSSRRSCPKWESYTLFQKYDEEMAILDRISAQKLHETESLRSIQMSPRSMSERIVYKFQTINKKSVDVGHNPYRELEAAYVAQICLTWEALSWNYKNFRSKHASRQDNDTGCSATVAQQFQQFQVLLQRYIENEPYEHGRRPEIYARMRLLAPKLLLVPEYQEEDQKDGGFQCKISSASFLKIMEDGIKTFMNFLKNDKEKPCQILAAYFRRNQRGTVDPTLLGLMKKVNQKKRVKVKDLNHAGKCLRKRKLKVEKDMDILMALTDLKVVSRVLRMSELSEEQLHWCEEKMSKVRIMEGKLQRDYSTPLFFPSL 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04085 568 MobiDBLite consensus disorder prediction 103 127 - -
Vian1g04085 568 MobiDBLite consensus disorder prediction 103 169 - -
Vian1g04085 568 PANTHER DNA LIGASE (DUF1666)-RELATED 13 567 - -
Vian1g04085 568 MobiDBLite consensus disorder prediction 146 163 - -
Vian1g04085 568 Pfam Protein of unknown function (DUF1666) 329 566 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04085 Vian-Chr1 63923273 63925628 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04085 - - gmx:100776190 912.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04085 1 63923273 63925628 Vian1g04085 1 63923273 63925628 ECH
Vian1g04085 1 63923273 63925628 Vian8g01480 8 34259442 34262127 PCT