Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01403 ATGATCACCTTACTAGACTTCTACCATGTCATGACTGCAATGGTGCCACTCTATGTGGCTATGATACTAGCCTATGGCTCCGTTAAGTGGTGGAAGATTTTCTCCCCTGACCAATGTTCTGGCATCAACCGTTTTGTGGCACTCTTTGCAGTGCCTCTTCTCTCCTTCCACTTCATAGCATCAAACAACCCTTACAAGATGAACCTTAGGTTCCTGGCTGCTGACACCCTTCAGAAGATCATCATACTAATCCTTCTTGCCATCTGGAGCAACTTCACCAAAAGGGGTTGCTTGGAGTGGACCATAACTTTGTTCTCCCTCTCCACCCTCCCCAACACCTTGGTCATGGGCATCCCTTTGCTCAAAGGTATGTATGGTGAGTTCTCTGGGAGCCTCATGGTTCAGATTGTGGTCCTTCAGTGCATCATTTGGTACACCTTGATGCTGTTCATGTTTGAGTTCAGGGGTGCCAGAATGCTTATCTCTGAGCAGTTCCCTGACACTGCTGGCTCCATTGTCTCCATCCATGTCGACTCTGATGTCATGTCATTGGATGGACGGCAACCGCTTGAGACTGAAGCTGAGATCAAAGAAGATGGGAAACTCCATGTCACTGTGAGGAAATCCAATGCCTCAAGATCAGACATCTTCTCTAGAAGGTCTCAGGGTCTCTCTTCCACCACTCCACGCCCTTCTAACCTCACAAATGCAGAGATATACTCTTTGCAGTCTTCTAGGAACCCAACTCCAAGAGGCTCTAGCTTCAACCACACTGACTTCTACTCCATGATGGCTGCCGGTGGCAGAAACTCCAACTTTGGAGCCTCCGATGTTTATGGTCTTTCCGCTTCAAGAGGGCCAACTCCAAGGCCTTCTAACTACGATGAAGATGGTGGAAAGCCAAAGTTTCATTACCATGCCGGTGGAACCGGACACTACCCTGCACCAAACCCTGGCATGTTCTCTCCCTCTAATGGCTCCAAAAGTGTTGCTGCTGCTAATGCTAATGCTAATGCCAAGAAGCCTAATGGGCAGGCTCAGCTGAAGCCTGAGGATGGAAATAGGGACCTTCATATGTTTGTTTGGAGTTCAAGCGCTTCACCGGTTTCTGATGTTTTTGGTGGCCATGAGTATGGAGGTCATGATCAGAAAGAAGTCAAATTGAATGTATCTCCAGGAAAAGTGGAGAATCATAGAGACACTCAGGAGGACTACCTGGAGAAAGATGAGTTCAGCTTTGGGAATAGAGGAATGGAGAGGGAGATGAATCAGCACGAGGGTGATAAAGTTGGAGATGGGAAGCCAAAAACCATGCCTCCTGCAAGTGTGATGACAAGACTTATATTGATTATGGTGTGGAGAAAACTCATCAGAAACCCCAACACCTACTCTAGTCTAATTGGCCTCACTTGGTCTCTTGTTTCATTCAGGTGGAATGTTGAGATGCCTGCCATAATAGCAAAGTCTATCTCCATATTGTCAGATGCAGGGCTTGGCATGGCCATGTTCAGTCTTGGTCTCTTCATGGCTTTGCAACCGAGGATCATAGCATGTGGAAATTCCATAGCAGCTTTTGCCATGGCTGTGAGATTCCTTACAGGTCCAGCTGTCATGGCAGCTGCTTCCATTGCTGTTGGACTCAAAGGTGTTCTCTTACACGTTGCCATTGTTCAGGCAGCTCTTCCGCAAGGAATTGTCCCATTTGTCTTTGCTAAGGAATATAATGTACATCCTGATATTCTCAGCACAGCTGTTATTTTTGGGATGTTGATTGCGTTGCCCATAACTCTGGTGTACTACATTTTGATGGGGTTGTGA 1818 0.4697 MITLLDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYKMNLRFLAADTLQKIIILILLAIWSNFTKRGCLEWTITLFSLSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEFRGARMLISEQFPDTAGSIVSIHVDSDVMSLDGRQPLETEAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMMAAGGRNSNFGASDVYGLSASRGPTPRPSNYDEDGGKPKFHYHAGGTGHYPAPNPGMFSPSNGSKSVAAANANANAKKPNGQAQLKPEDGNRDLHMFVWSSSASPVSDVFGGHEYGGHDQKEVKLNVSPGKVENHRDTQEDYLEKDEFSFGNRGMEREMNQHEGDKVGDGKPKTMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFRWNVEMPAIIAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIAAFAMAVRFLTGPAVMAAASIAVGLKGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITLVYYILMGL 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01403 605 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 604 - -
Vian8g01403 605 Pfam Membrane transport protein 9 600 IPR004776 GO:0016020|GO:0055085
Vian8g01403 605 MobiDBLite consensus disorder prediction 213 235 - -
Vian8g01403 605 NCBIfam auxin efflux carrier 1 605 IPR014024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01403 Vian-Chr8 33275732 33278852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01403 1 596 Organic Solute Cotransporters AT1G73590 74.522 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01403 K13947 - gmx:100499637 1159.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04217 1 65105590 65112010 Vian8g01403 8 33275732 33278852 PCT