Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01206 ATGAGAAACTTAGTACTAGTACCACTGATTTTGCTTGTTCTTGCTGGTTTTCTATCCAAGTCAAAAGGGTTTATGCAACCATTTACAGATCGTCCTGATGCACTCTGGGCTGACATATTGTCTGATCGTTTCCTTGATCCATTTCGTGCGTTAGAGCAAATCCCATTTGGGTTTGGCAAAGATCAGGCATCCATGGCTGTGTCACCTGCACGAGTAGATTGGAAGGAGACACCAGAGGGACATGTTATAATGATAGATGTGCCAGGGTTGACGAAAAATGATATAAAGATAGAAGTGGAGGGGAATACAGTGCTGAGAGTGAGTGGAGAAAGGAAGAAGGAGGAGGAGAAGGAAGGGGATCACTGGCATAGAGTGGAGAGATCTTATGGCAAATTCTGGAGGCAGTTCAAGTTACCAGACAATGTAGATTTTGATTCTCTCAAGGCTAGGTTAGAGAATGGAATGCTTACTCTCACCATGGCCAAGTTGTCACCTGAAAAGACCAAAGCTTCAAGGGTGGTTAACATTGCAGGGGATGATGAGCGCAAGCAAGATCTTTGA 561 0.4421 MRNLVLVPLILLVLAGFLSKSKGFMQPFTDRPDALWADILSDRFLDPFRALEQIPFGFGKDQASMAVSPARVDWKETPEGHVIMIDVPGLTKNDIKIEVEGNTVLRVSGERKKEEEKEGDHWHRVERSYGKFWRQFKLPDNVDFDSLKARLENGMLTLTMAKLSPEKTKASRVVNIAGDDERKQDL 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01206 186 SUPERFAMILY HSP20-like chaperones 57 173 IPR008978 -
Vian8g01206 186 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 61 179 IPR002068 -
Vian8g01206 186 FunFam 22.0 kDa heat shock protein 33 176 - -
Vian8g01206 186 Pfam Hsp20/alpha crystallin family 73 176 IPR002068 -
Vian8g01206 186 CDD ACD_ScHsp26_like 71 162 - -
Vian8g01206 186 Gene3D - 24 177 IPR008978 -
Vian8g01206 186 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 62 175 IPR031107 -
Vian8g01206 186 ProSiteProfiles CS domain profile. 67 174 IPR007052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01206 Vian-Chr8 30739242 30739802 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01206 K13993 - gmx:547971 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01206 8 30739242 30739802 Vian8g01206 8 30739242 30739802 ECH
Vian8g01206 8 30739242 30739802 Vian3g01184 3 13107104 13109615 PCT