Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01184 ATGGCAGTGATAAGTGCTGTTCATTCTGTTAGCTCCCTGCATTTACAATCACACCTTCAGAGGCTTAACAATGGAGAATTCTTCTTCTCTACAAGACCAAGGAAAATGAAGGTCCCTCTTCCTTGCCATCACCATCACCATCCAATCTACTCAAGTAATGCTTTTGGTTGTAGTGACAGAACCAGCATCATAATAAACTCAACATCTGGTTCTTCCACAGCAACTTCTGCTGTTGAGGGGTCCCTCTCTGAGGTAGAAAAGATAAAGCAGAGGTTTCGTACATGGCATTGGAAGGGTCAATATTCAATCAACTACTTTGTTTCTTCGGACTCTCCTCAGCAGTTGCAAGCCAACCACCCTCCCCTCTTACTTGTTCATGGCTTCGGTGCCTCCATTCCTCACTGGCGCAGGAATATCTATATTCTAGCCCAGAATTATACTGTGTATGCTATTGATCTTCTCGGTTTTGGGGCTTCAGATAAACCTCCAGGCTTTCAATATACCATGGAAACTTGGGCTCAGTTGATCTTGGATTTCTTGAATGAAGTTATTCAGAAGCCAACAGTACTTATAGGAAACTCTGTTGGAAGTCTCGCCTGTCTCATTGCTGCCTCAGATTCAAATCAAACTCTTGTGAGAGGCATTGTGCTGTTAAATTGTGCTGGTGGCATGAACAACAAAGCGATTGTTGATGACTGGAGGATCAAGCTACTATTACCCTTGCTTTGGCTGATTGATTTTTTATTAAAGCAAAAGGGAATTGCCTCAGCAATTTTTGAGCGAGTTAAACAAAGAGAGAATTTAAGAAACGTTTTGAGTTCAGTGTATGGAAATAAGGAGTCTGTGGATGAAGAACTAGTGGAGATCATCAGGGAACCAGCCAATGCTCCAGGGGCCTTAGATGCATTTGTGTCCATTGTGACTGGTCCACCGGGCCCCAATCCGGTGGTGTTGATGCCAAACATATCCTTGCCTGTTTTACTTTTGTGGGGAGACGAAGATCCCTTTACTCCAATTGATGGACCTGTTGGCAAGTACTTTTCTTCATTGCCTTCTCAACAAGAGAATGTTAAACTCTTCTTACTTGAAGGTGTTGGACATTGTCCCCATGATGACAGACCTGACTTAGTACATGAAAAGTTGCTTCCCTGGTTGGCAAGTCTTTGA 1167 0.4319 MAVISAVHSVSSLHLQSHLQRLNNGEFFFSTRPRKMKVPLPCHHHHHPIYSSNAFGCSDRTSIIINSTSGSSTATSAVEGSLSEVEKIKQRFRTWHWKGQYSINYFVSSDSPQQLQANHPPLLLVHGFGASIPHWRRNIYILAQNYTVYAIDLLGFGASDKPPGFQYTMETWAQLILDFLNEVIQKPTVLIGNSVGSLACLIAASDSNQTLVRGIVLLNCAGGMNNKAIVDDWRIKLLLPLLWLIDFLLKQKGIASAIFERVKQRENLRNVLSSVYGNKESVDEELVEIIREPANAPGALDAFVSIVTGPPGPNPVVLMPNISLPVLLLWGDEDPFTPIDGPVGKYFSSLPSQQENVKLFLLEGVGHCPHDDRPDLVHEKLLPWLASL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01184 388 FunFam Predicted protein 81 387 - -
Vian3g01184 388 Gene3D alpha/beta hydrolase 68 387 IPR029058 -
Vian3g01184 388 PRINTS Alpha/beta hydrolase fold signature 326 340 IPR000073 -
Vian3g01184 388 PRINTS Alpha/beta hydrolase fold signature 145 160 IPR000073 -
Vian3g01184 388 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 67 387 - -
Vian3g01184 388 Pfam Alpha/beta hydrolase family 122 378 IPR000073 -
Vian3g01184 388 SUPERFAMILY alpha/beta-Hydrolases 88 385 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01184 Vian-Chr3 13107104 13109615 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01184 122 388 Miscellaneous Gene Families AT1G80280 25.000 4.50e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01184 - - gmx:100775473 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01206 8 30739242 30739802 Vian3g01184 3 13107104 13109615 PCT