Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01195 ATGGCTTGTTGGTCTGCAGAAAATGCCACAAAGGCCTATCTCAACACACTGAAAATGGGTCAAAAGGCCAAAGAGCCAGCAGTTGCAGAGTTCATAGCAGCACTAGCTGCTGGCAACAATGCACAACTGATGGTTGTGGCATGTGCTGGTGCAGCAGACTCCACCACACTAGCATTAGTCAGTGCTGCACATCAAACCGGTGGCCATGTTGTTTGCATTGTCTCCGGCCATGATGAATTAAACGACTCAAAAAAGGTTCTTGGAGTGAATGCTAGTGAAGTCCAGTTCAAGGTTGGAGAGGTTCAACAAGAACTGCTGTTGTTGAGACAAGCAGATTTTGTGGTGATTGATTGCAACCATGTTAGCCATGGAGAGATTGTTAAAGCAATCCAAGATGGTGGCATGCAAAATGGTGTAGTGATTGTTGGCTGCAATGCACTTAGCTGCAGAGGGTCATGGTGGTCTTGTGGATCAAAAACTCAGTTGCTGCCTATAGGAAAAGGGCTTCTGGTTACGAGATTTGGAAGAAGTGCTGCAAGCCCAAAACATGGATCTGGAGTGAGTAAGAACAGAAGTAGTCGTTGGATTGTTAAGGTAGATAAATGCACTGGTGAAGAACATGTGTACAAGATCAGAGTTCCACAGGGAAAAGTGATTCCAGCTTAA 666 0.4535 MACWSAENATKAYLNTLKMGQKAKEPAVAEFIAALAAGNNAQLMVVACAGAADSTTLALVSAAHQTGGHVVCIVSGHDELNDSKKVLGVNASEVQFKVGEVQQELLLLRQADFVVIDCNHVSHGEIVKAIQDGGMQNGVVIVGCNALSCRGSWWSCGSKTQLLPIGKGLLVTRFGRSAASPKHGSGVSKNRSSRWIVKVDKCTGEEHVYKIRVPQGKVIPA 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01195 221 PANTHER DUF1442 FAMILY PROTEIN 3 210 IPR009902 -
Vian8g01195 221 Gene3D Vaccinia Virus protein VP39 5 176 IPR029063 -
Vian8g01195 221 Pfam Protein of unknown function (DUF1442) 3 210 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01195 Vian-Chr8 30617167 30618021 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01195 - - gmx:100805528 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01195 8 30617167 30618021 Vian8g01195 8 30617167 30618021 ECH
Vian8g01195 8 30617167 30618021 Vian3g01175 3 13047676 13048436 PCT