Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01175 ATGGCTTGCTGGTCTGCAGAAAATGCCACAAAGGCCTATCTCAGCACTTTGAAAATGGGTCAAAAGTGCAAAGAGCCAGATGTGGCTGAGTTCATATCAGCACTTGCTGCAGGAAACAATGCACAACTGATGGTTGTGGCATGTGGTGGTGCAGCAGACTCCACCACGCTTGCATTGGTTGCTGCTGCTCATCAAACTGGCGGCCAAGTGATTTGTGTTGTCCCTGGCCATGAAGAGCTGAGAGCCTCAAAAGTTGCCTTGGGAGTGGCTTCTCATGAAGTTCAATTCATGGTAGGAGAAGCTCAGGAGCTTCTGTTAAACCAATACGATCAGGCAGCAGATTTTGTTCTCATTGACTGCAACCTTGAGAAGCACGAAGAGATTTTGAAAGCAGTTGAAGAGGGTAGGAAGGAAAATGGGACGGTGGTCGTGGGGTACAATGCATTTAGCTGCAGAAAGTCTTGCTTGGCATGTGGATCAAAAACACAGCTTCTTCCCATAGGAGAAGGTTTGCTAGTGACTAGATTTGGAATGACTGAAACAAGTCCAAAGTATGGAAGCAGAATGGGAAAATTCAAAAGCCGATGGGTTGTAAAGGTAGATAAATGCACAGGCGAGGAACATGTGTTCAGAGTCAGATCTCCTCACAGGAAAGTCATCCAAGCTTAA 669 0.4634 MACWSAENATKAYLSTLKMGQKCKEPDVAEFISALAAGNNAQLMVVACGGAADSTTLALVAAAHQTGGQVICVVPGHEELRASKVALGVASHEVQFMVGEAQELLLNQYDQAADFVLIDCNLEKHEEILKAVEEGRKENGTVVVGYNAFSCRKSCLACGSKTQLLPIGEGLLVTRFGMTETSPKYGSRMGKFKSRWVVKVDKCTGEEHVFRVRSPHRKVIQA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01175 222 Gene3D Vaccinia Virus protein VP39 5 175 IPR029063 -
Vian3g01175 222 Pfam Protein of unknown function (DUF1442) 3 211 IPR009902 -
Vian3g01175 222 PANTHER DUF1442 FAMILY PROTEIN 3 211 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01175 Vian-Chr3 13047676 13048436 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01175 - - gmx:100816283 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01175 3 13047676 13048436 Vian3g01175 3 13047676 13048436 ECH
Vian8g01195 8 30617167 30618021 Vian3g01175 3 13047676 13048436 PCT