Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01193 ATGCCCCAAAACGACACCCACTCCCACCAAAACGGTGAAACCACCGTCACCACCCCACTACACCCTCCACTTCTGACGCTCCACCTTCAAGCCATGACCTCAACCACCTCAACCTCCACCGACCCCCTCCCATCAGACGACGGCGCGGCGGCCGTCAGGGCTGTCAACAAACGGTTCGAGGGGCTCCTCACTGTCCGGACCAAGGCTATCAAAGGCAAGGGAGCCTGGTACTGGGCACACCTCGAGCCCATACTCGTTCCACACCCAGACACCGGCCTCCCGAAATCAGTGAAACTCAAATGCTCCCTCTGCGACTCTCTCTTCTCCGCTTCAAACCCTTCAAGAACAGCTTCCGAACACTTAAAGCGTGGAACTTGCTCCAACTTCAGCTCCGGGTTGAGACCCGGTTCGGTCCCTTCTCCCCTCCCCATTTCCTCCATCACTCCCGGTTCGAACCGCAAAAGGGGTTCGCCTCAAATGGGTGCCACGTCACCCTCTTCTTATCAAAATCACTCCTTGGCCTTGGTCGAGTCTTCCCGCTTCGACATGGGGTACACCCCGATGCAGAACAGTAACAACAACAGCAATAGTAATAATAATAATAACAACAACATTATGCTCTTGCAGCATCACGGGCAGAGCCAACAGCATTTAATGTTGTCTGGTGGGAAGGATGATTTGTGTGCTTTGGCCATGTTTGAGGACAGTGTGAAGAAGTTGAAGAGTCCCAAGACTTCTCCTGGTCCTGCTTTGAACAAGGACCAGGTGAATTCTGCTTTGGACTTGCTCTTCGATTGGTTCTATGAGACTTGTGGTTCTGTGTCCTTGTCTAGTCTGGAACATAGAAAGTTTCAGGCTTTTTTGGGCCAGGTTGGGTTGCCCGCCAATTTGAGGAGGGAGGTTTCTGGGGGGAGGCTTGATGCTAGGTTCGGGGAGGCCAAGGCTGAGTCCGAGGCTAGGATTAGGGACGCCATGTTTTTTCAGTTGGCGAGTGATGGGTGGAAAAGTGGGGGTTTGTTTAACTTTAACTCGTGTTGTGGTGGGGGGGAGAGTTTGGTGAAGTTTGTGGTGAATCTCCCCAATGGGAGTAGTGTGTTTCAGAAGGCTGTGTTCACTGGTGGAGTGGAGAATTCTAAGTATGCCGAGGAGGTTTTGTGGGAGATGGTTACTGCTGTTACTGGGAGTGTTGTCCACAGGTGTGTGGGGATTGTCGCAGATAAGTTCAAGGCGAAGGCGTTGAGGAACTTGGAAGCGCAGCACCATTGGATGGTGAACACTTCCTGCCAGCTTCAGGGGTTGGTTAGCTTGATCAAGGATTTTAACCGCGAGTTGCCGCTTTTCAGGTCTGTGATTGAGAATTGCTTGAAGGTTGCGAATTTTATGAACAGTGAGTCGCAGGTGAGGAGTCTTTTCCTCAAGTGCAGGGTGCAAGAGATGGATTGTGGCGGCCTAATTCGCGTGCCTTCACCCAAATGTGATCCGTTGAAGAATTTTCAACTGGTGTTTCCTATGTTGGAGGACATTTTGAGCTGTGCCAGAGTGATTCAGATGGTTGTGATGGAGGATGGGTTTAAGGTGATGTGTATGGAAGATACGCTAGTGAGGGAGGTTGCAGGGATGGTGCAGAATGAGGGGTTTTGGAACGAGTTGGAGGCGGTTTATTCACTTGTGAAGCTTGTTAGAGGGATGGTGCATGATGTCGAGGCTGAGAGGCCATTGATGGGTAGGTGCTTGCCTCTTTGGGAGGAGCTGAGGAGCAAGGTGAAAGAGTGGTGTGGGAAGTTCAACATTGTGGAAGGACCTGTGGAGAAGATAGTTGAGAAGAGGTTTAGGAAGAATTATCATCCTGCTTGGGCAGCAGCGTTTATACTTGATCCACTTTACTTGATTAAGGATGCAAGTGGAAAGTATCTTCCTCCTTATAAGTGTTTGACGCGAGAACAGGAGAAGGATGTGGACAAGTTACTGACGAGGCTGGCTTCGCGAGAAGAGGCTCATGTTGTGTTGATGGAGCTAATGAAATGGAGGTCAGATGGTCTTGATCCGCTTTATGCACAGGCTGTTCAGATGAAGCAGAGGGATCCGGTGACAGGGAAGATGAAAGTTGCAAATCCACTGAGTAGTAGACTTGTGTGGGAAACATGTTTGAGTGAGTTTAAATCCTTGGGGAAGATTGCAGTGAGGCTTATTTTTCAGCACGCGACTTCATGTGGGTTTAAGAGTAATTGGTCTTTTATGAGGAAATTTTCAGCTAATAAACAGTCAAGAGTTGCCTTGGAAAGGGCTCAGAAAATGATTTACATTGCAGCTCATGCCAAGCTTGAAAGGAGAGACTTTTCCAGTGAGGAAGAGAAGGATGCAGAGCTGTTTGCCATGTCTGGTAGTGAGGATGGCATGCTGGCTGAAGTTTATGCTGATGCTCCCTTAGTAGTTGGAATGGCTTGA 2445 0.4961 MPQNDTHSHQNGETTVTTPLHPPLLTLHLQAMTSTTSTSTDPLPSDDGAAAVRAVNKRFEGLLTVRTKAIKGKGAWYWAHLEPILVPHPDTGLPKSVKLKCSLCDSLFSASNPSRTASEHLKRGTCSNFSSGLRPGSVPSPLPISSITPGSNRKRGSPQMGATSPSSYQNHSLALVESSRFDMGYTPMQNSNNNSNSNNNNNNNIMLLQHHGQSQQHLMLSGGKDDLCALAMFEDSVKKLKSPKTSPGPALNKDQVNSALDLLFDWFYETCGSVSLSSLEHRKFQAFLGQVGLPANLRREVSGGRLDARFGEAKAESEARIRDAMFFQLASDGWKSGGLFNFNSCCGGGESLVKFVVNLPNGSSVFQKAVFTGGVENSKYAEEVLWEMVTAVTGSVVHRCVGIVADKFKAKALRNLEAQHHWMVNTSCQLQGLVSLIKDFNRELPLFRSVIENCLKVANFMNSESQVRSLFLKCRVQEMDCGGLIRVPSPKCDPLKNFQLVFPMLEDILSCARVIQMVVMEDGFKVMCMEDTLVREVAGMVQNEGFWNELEAVYSLVKLVRGMVHDVEAERPLMGRCLPLWEELRSKVKEWCGKFNIVEGPVEKIVEKRFRKNYHPAWAAAFILDPLYLIKDASGKYLPPYKCLTREQEKDVDKLLTRLASREEAHVVLMELMKWRSDGLDPLYAQAVQMKQRDPVTGKMKVANPLSSRLVWETCLSEFKSLGKIAVRLIFQHATSCGFKSNWSFMRKFSANKQSRVALERAQKMIYIAAHAKLERRDFSSEEEKDAELFAMSGSEDGMLAEVYADAPLVVGMA 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01193 814 MobiDBLite consensus disorder prediction 1 21 - -
Vian8g01193 814 SUPERFAMILY Ribonuclease H-like 396 775 IPR012337 -
Vian8g01193 814 MobiDBLite consensus disorder prediction 1 22 - -
Vian8g01193 814 MobiDBLite consensus disorder prediction 112 169 - -
Vian8g01193 814 PANTHER OSJNBA0013A04.12 PROTEIN 55 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01193 Vian-Chr8 30588129 30592455 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01193 - - gmx:100814598 1417.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01193 8 30588129 30592455 Vian3g01174 3 13028325 13030475 ECH
Vian8g01193 8 30588129 30592455 Vian8g01193 8 30588129 30592455 ECH
Vian8g01193 8 30588129 30592455 Vian3g01174 3 13028325 13030475 PCT