Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01174 ATGGCTTCCACCATCGCTCCCGCAATGCCTTCCACCTCCACCGACCCCGACCCCGACGCTGCCGTCAGGGCGGTTAGGAAACGCTACGAGGGCCTTCTCACAGTGCGCACGCGCGCGATCAAAGGCAAAGGCGCGTGGTACTGGGCCCATCTCGAGCCCACTCTCCTCGGCAACGCGGTCAAGCTCAAGTGCTCCCTCTGCGACTCTCTCTTCTCCGCTTCCAACCCTTCTCGAACCGCTTCCGAGCATCTCAAGCGTGGTACGTGTCCCAATTTCAACCACTCCTCCTTGCCTTCACCGTCTCCTATTTCTACCGTGCTCTCCCATTCCAACAACGGCAGAAAGAGAACCTCCTCCTCAGCCTCTCCGAATCAGGACCGCTCCGTTCAGCATTTGATGTTGTCTGGAGGGAAAGATGATTTGTGTGCTCTCGCTGTTTTCGAGGACAGTGTGAAGAAGCTCAAGAGTCCTAGGAATTTGTCGCATGTTGCTCCTCCTGAGTTGACCCAGGACCAGGTTAACTCCGCTGTTGAATTACTGGCAGATTGGTTCTACGAGTCTTGTGGTTCTGTGCCTCTCTCTTCTCTTGAACACCCCAAGTTTCAGTCCTTTCTCACCCAGCTTGGTTTGCCGGTGACTCTGTTGAGACGCGAGATATATTGTTCTAGGCTCGAGGATAGGTTCGGGGCGGTCAAGGCCGAGTCCGAAGCTAGAATCCGAGACGCACTGTTTTTTCAAGTGGGGTGTGATGGTTGGAAGGGCGAGGATGGTGTGGCGAAGTTCATAGTGAACCTTCCGAATGGGACTAGCGTGTTCCACAAGGTGGTGCTTGGTGGGGAGGTGGTGTCGTCTAAGTATGCTGAGGAGATTTTGTGGGAGGTGGTGAAGGGTGTTTGTGGAAGTGATGTGCAGAGATGTGTTGGGATTGTTGCCGACAGGTTTAAGGGTAAGGCGTTGAGGAACTTGGAGGTTCAGAACCATTGGATGGTGAATGTTGCTTGTCAGGTTCAGGGGTTCACGGGTTTGATCAAGGATTTTAGCAACAACTTACCACTTTTCAGGGTTGTCACTGAAAATTCACTCAAGGTTGCTAATTTTATCAACACTGAGTCTCAAGTTAGGGGTAGTTTCCTAAGGTACCGAATGCAGGAACTGGAATGTGCTGGGCTGGTTCGGGTTCCCTCTCCAAAATTTGACGTGTTGAAGGACTTTACGTCTGTGTTTCCGATGCTGGAGGACATCCTGAGATGTGCTGCCGTGATCCAAATGGTGGTGATGGAGGACGCGTTTAAGGTGGCTTGTATGGAGGACCCACTGGCCAGAGAGATTGCCGGGATTGTTCAGAGTGAGGGATTCTGGAATGAACTGGAGGCGGTTTATTCGCTGGTGAAGCTCATCAGAGGAGTGGTTCAGGACATTGAGGCTGAGAGGCCGTTGGTTGGTCGGTGTTTGCCTCTCTGGGAGGAGGTTAGAACCAAGGTGAAGGAGTGGTGTGTTAAGTACAGTATTGTGGTTGAACCCGTAGAGGAAATACTTGAAAATCGATTTAGGAAGAATTATCACCCTGCATGGTCAGCTGCATTTATACTTGATCCTCTTTACTTGATTAAAGATTCGTGTGGAAAGTACCTTCCTCCGTTCAAGTGCTTAACTCGTGAACAAGAGAAAGATGTCGATAAGTTATTGACGAGGCTGGCTTCACGAGAAGAAGCTCATGTGGTGTTGATGGAGCTCATGAAGTGGAGATCAGAAGGGCTTGACCCTCTTTATGCACAGGCTGTGCAGATGAAACAACAAGACCCCATTACAGGGAAGATGAAGGTAGCAAATCCACTTAGCAGTAGACTTGTTTGGGAAACTTGCCTCAGCGAATTTAAATCCTTACGGAAGCTTGCAGTGAGGCTCATTTTTCTGCATGCAACCTCATGTGGGTTTAAGAGTAATTATTCTTTCATCAGGAAGCTTTCTGCTCAGAAGCACTCGAGAATTTCCTTGGAAAGAGCTCAGAAAATGATATATGTTGCAGCTCATGCCAAGCTTGAAAGACGAGATTTTTCCAATGAGGAAGAGAAAGAGGCAGAACTGCTTGCCATGGAAAGCAGTGATGATGGCATGCTGGCTGTAGTCTTTGCCGATACACCCCTAATGTAA 2151 0.4974 MASTIAPAMPSTSTDPDPDAAVRAVRKRYEGLLTVRTRAIKGKGAWYWAHLEPTLLGNAVKLKCSLCDSLFSASNPSRTASEHLKRGTCPNFNHSSLPSPSPISTVLSHSNNGRKRTSSSASPNQDRSVQHLMLSGGKDDLCALAVFEDSVKKLKSPRNLSHVAPPELTQDQVNSAVELLADWFYESCGSVPLSSLEHPKFQSFLTQLGLPVTLLRREIYCSRLEDRFGAVKAESEARIRDALFFQVGCDGWKGEDGVAKFIVNLPNGTSVFHKVVLGGEVVSSKYAEEILWEVVKGVCGSDVQRCVGIVADRFKGKALRNLEVQNHWMVNVACQVQGFTGLIKDFSNNLPLFRVVTENSLKVANFINTESQVRGSFLRYRMQELECAGLVRVPSPKFDVLKDFTSVFPMLEDILRCAAVIQMVVMEDAFKVACMEDPLAREIAGIVQSEGFWNELEAVYSLVKLIRGVVQDIEAERPLVGRCLPLWEEVRTKVKEWCVKYSIVVEPVEEILENRFRKNYHPAWSAAFILDPLYLIKDSCGKYLPPFKCLTREQEKDVDKLLTRLASREEAHVVLMELMKWRSEGLDPLYAQAVQMKQQDPITGKMKVANPLSSRLVWETCLSEFKSLRKLAVRLIFLHATSCGFKSNYSFIRKLSAQKHSRISLERAQKMIYVAAHAKLERRDFSNEEEKEAELLAMESSDDGMLAVVFADTPLM 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01174 716 PANTHER OSJNBA0013A04.12 PROTEIN 25 682 - -
Vian3g01174 716 MobiDBLite consensus disorder prediction 91 128 - -
Vian3g01174 716 SUPERFAMILY Ribonuclease H-like 279 681 IPR012337 -
Vian3g01174 716 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01174 Vian-Chr3 13028325 13030475 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01174 - - gmx:100790244 1268.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01193 8 30588129 30592455 Vian3g01174 3 13028325 13030475 ECH
Vian3g01174 3 13028325 13030475 Vian3g01174 3 13028325 13030475 ECH
Vian8g01193 8 30588129 30592455 Vian3g01174 3 13028325 13030475 PCT