Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01188 ATGGATAGACATCAAAAGGGTCTTCTTTTACAATCCAATACAACATGTGAATCTCTTCTTAACGAACTTCAGATAATATGGAATGAAGTCGGGGAGTCTGAGACTGAAAAAGATAGAATGTTGTATGAGCTTGAAGAAGAGTGTGTAGAAGTATATAGAAGAAAGGTAGATAAAGCTAATCGGTCTAGAGCTCAACTAAGGCAGGAGATTGCTGATTCCGAGGCAGAGCTTGCATGTATCTGCTCAACAATGGGAGAGCGACCTGTGCATTTTAGACAGTTTGACAAAAATGCTGGAAGCTTAAAGGAAAAGCTGGCAAGAGTTCACCCAGAGCTGGAGGAAATGCGGAAAAGGAAGTTTGAGCGTAGAAATCAATTTATAGAAGTTCAAGAACAGATTCAAAGTATCTCAAATGAGATTTGTAGTACAGGAGAATATATTACTGCTGTTGTAGATGAAACTGATTTGTCATTGAGAAAGCTTGAAGAATTACACAGAGAGCTCCTTGCACTTCAGAAAGAGAAGAGTGAGCGCCTCAAGAAGGTTCAAGACCAAATATGTACCTTGAATTCTCTCTGTTCAGTGCTTGGTTTGGACTTCAAGCAGACAGTCACTGGAGTCCATCCTAGCTTAGGAATTTCAGAAGGTCCTAGGAGTGTCAATAGTGAAACCATAAATCAATTGGCTATTGCCATACAAGAATTGCGAAAAGTTAAACTGCAGAGAATGCAAAGGCTTCAAGATCTAGCTTCAACAATGTTGGAGCTCTGGAATTTGATGGATACGCCTGTTGAAGAGCAACAGATGTTTCAGAATGTTACTTGTAATATCGCTGCTTCAGAAGATGAAGTAACTGAACCAAACAGCTTGTCTGAGAACTTCATCAACTATGTCGAGGCAGAAGTATCCAGGTTGGAAGAGTTAAAATCAAGCAAAATGAAAGAGCTTGTTTTGAGGAAAAGAGCAGAGCTAGAGGAGATTTGTCATAAGACTCATTTGATTCCAAAAATTGATAGTGCAGTGGAACAAGCTGTTGAAGCGATAGAATCTGGAGTGGTAGACCCAGCTTGTGTGCTTGAACAGCTTGAACTTCAGATTGCCTCTGCAAAAGAGGAAGCTTTTGTCAGAAAAGAAATACTTGAAAAATTTGAGAAATGGTTAGCAGCACGTGAAGAAGAATCTTGGCTTGAGGAGTACAACATGGATGAAAATCGATACAATGCTGGGAAAGGTTCTCATCTTACTCTCAAGCGAGCGGAGAAAGCCCGTGCCTTGGTCAGCAAACTACCAGCAATGGTAGAGGCTTTAACTTCAAAAACTGTAGCATGGGAAAAAGACAAAGGCATTGAGTTCACATATGATGGTACCTGTCTGATCTCTATGCTTGAGAACTACTCGCTATCACGGCAAGAGAAGGAGCAAGAACGTCGTAGGCAGCGGGAACTGAAGAAACTTCAGGGACAAATGACAGCGGAAAAGGAAGTACTCTATGGGTCAAAGGTAAGCCCTTCAAAGGCCCAGAGTGCAAAAAAGACACCTAGAGCTGGAAGCGCAGCATGTAGAAAAATCTCCCTTGGATGTCAGACACCAAAATCTGATTCGAAACCTTATCAGTCACAGTCATCCTTCATAAAGAGGACAGATAAAGCCCACCAAAATGATCGACTAAATAATCTGGATGATGATGTTTCATATTTATCATCAGCTAGAAGAGGACTTGATACTGCTGGTGTTCCTATGAAAAAATTCTCTACTGGTGCTGTAAGTGTTCGTGAAATGGAATCTCCTTCTACACGCCAACCTTTTTCTCCCATCTCTTTAACGGTATCATCGAAAGCTAATGATGCAAATGCTGTAGACGATATACAGAACAAGAAGCTGCCGAACACATTAGTATAG 1899 0.4097 MDRHQKGLLLQSNTTCESLLNELQIIWNEVGESETEKDRMLYELEEECVEVYRRKVDKANRSRAQLRQEIADSEAELACICSTMGERPVHFRQFDKNAGSLKEKLARVHPELEEMRKRKFERRNQFIEVQEQIQSISNEICSTGEYITAVVDETDLSLRKLEELHRELLALQKEKSERLKKVQDQICTLNSLCSVLGLDFKQTVTGVHPSLGISEGPRSVNSETINQLAIAIQELRKVKLQRMQRLQDLASTMLELWNLMDTPVEEQQMFQNVTCNIAASEDEVTEPNSLSENFINYVEAEVSRLEELKSSKMKELVLRKRAELEEICHKTHLIPKIDSAVEQAVEAIESGVVDPACVLEQLELQIASAKEEAFVRKEILEKFEKWLAAREEESWLEEYNMDENRYNAGKGSHLTLKRAEKARALVSKLPAMVEALTSKTVAWEKDKGIEFTYDGTCLISMLENYSLSRQEKEQERRRQRELKKLQGQMTAEKEVLYGSKVSPSKAQSAKKTPRAGSAACRKISLGCQTPKSDSKPYQSQSSFIKRTDKAHQNDRLNNLDDDVSYLSSARRGLDTAGVPMKKFSTGAVSVREMESPSTRQPFSPISLTVSSKANDANAVDDIQNKKLPNTLV 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01188 632 MobiDBLite consensus disorder prediction 468 556 - -
Vian8g01188 632 Pfam Microtubule associated protein (MAP65/ASE1 family) 17 514 - -
Vian8g01188 632 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 11 545 IPR007145 GO:0000226|GO:0008017
Vian8g01188 632 Coils Coil 462 482 - -
Vian8g01188 632 Gene3D - 366 499 - -
Vian8g01188 632 Coils Coil 49 76 - -
Vian8g01188 632 MobiDBLite consensus disorder prediction 527 546 - -
Vian8g01188 632 MobiDBLite consensus disorder prediction 468 488 - -
Vian8g01188 632 Coils Coil 158 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01188 Vian-Chr8 30515306 30519722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01188 11 542 EF-hand Containing Proteins AT5G62250 55.904 1.23e-178 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01188 K16732 - gmx:100777734 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01188 8 30515306 30519722 Vian3g01170 3 12974830 12978921 ECH
Vian8g01188 8 30515306 30519722 Vian8g01188 8 30515306 30519722 ECH
Vian8g01188 8 30515306 30519722 Vian3g01170 3 12974830 12978921 PCT