Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01185 ATGGCCCTCGAAACCTGGCTCATCAAGGTCAAAACGGCGCTGTCGCACAGCCTCACGAAGAAACCGTCGTTTTCTTCGTCGAAGCCAAAGCACGTCTCGGTTTTGTCCTTCGAGATCGCGAACGTGATGTCGAAGCTCCTCCACCTCTGGCAGTCCCTCTCCGACACCAACGTCATTCGCCTCCGGAACGACGCCATCGCGCTCGAAGGCGTGCGCAAGCTCATCTCAAACAACGAGTCTTTTCTTCTAAGCCTCGCCGTGGCCGAGTTCGCCGACTCGCTCAGACTCGTTGCCAACTCGGTCTCCCGACTCAGCAACTACTGCCACGAACCTTCTCTCCGATCCTTCCACCGAATCTTCACCGAGTTCGCGAACTCGGGCCTCGACCCGCGCGCGTGGACCCTCACCACCCCGAAAGACATCGAAACCAAACACAGAAAATTGCAACATTACGTGACTCTCACGGCAACACTCCACAAAGAAATCGACGCTCTCACGCTCGTCGAAGGCGCGTTTAAAAAAGCGCTTCTCAACGCTGACAACGCCGCCACCGAACACTCCTCTCACAAAAAACTAAGCGATCTTCAGCAGAAGATTTTCTGGCAGAAGCAAGAGGTGAAGAACTTGAAGGAACGGTCGTTATGGAACAAAAACTTCGATGGGGTTGTTTTGTTGTTAGCAAGGTTCGTTTTCACCGTGTTAGCGCGGATTAAAGTTGTTTTCGGAATCGGCCATAGTAGTAGTGTTCCCTTTTTGTCACGTAGTTTGTCTTCCATTTATCCTTCCGATCACCAAAACCCTATTTCTTCTTGCTCCTTTGTATCTGGGCCGTTGAGAAGCTCAAAACTTGACGACGAAAATGAAAATTTGGGAAATGGGTTTTTCGAGTCTAATTGCAAGGTGTTGAAGTTGAAGGGTGACGGTGACGGTGATACTTTGGGTGCTTCAGCTTTGGCCTTGCACTATGCAAACTTGGTGATGGTGTTGGAGAAGATGATAAAGTCACCCCAGTTGGTTGGGGTGGATGCCAGGGATGATTTGTATGGGATGTTACCAAGTAGCATAAGGTCATCTTTGAGGGCAAGATTGAGAGGGGTGGGGTTTTCTGCATGTGATGATCACGTGCTCGCCGGAGAATGGAGGGATGCATTGGGGAGGATTCTGGGGTGGCTGGCACCATTGGCACATAACATGGTAAAGTGGCACAGCGAAAGAAGCTATGAGCAGCAGAACTTAGTACCAAAAACCAATGTGTTGTTGTTGCAGACTTTGTTCTTTGCAAACAAAGAGAAGACAGAAGCTGCCATCACTGAGCTGCTTGTGGGGTTGAACTATGTTTGGAGGTTTGAGAGGGAAATGACAGCTAAGGCATTGTTTGAATGTACCAAATTTAATAATGGCTTCTTAAGCTTGCACAAGCCCAGCTAA 1428 0.4944 MALETWLIKVKTALSHSLTKKPSFSSSKPKHVSVLSFEIANVMSKLLHLWQSLSDTNVIRLRNDAIALEGVRKLISNNESFLLSLAVAEFADSLRLVANSVSRLSNYCHEPSLRSFHRIFTEFANSGLDPRAWTLTTPKDIETKHRKLQHYVTLTATLHKEIDALTLVEGAFKKALLNADNAATEHSSHKKLSDLQQKIFWQKQEVKNLKERSLWNKNFDGVVLLLARFVFTVLARIKVVFGIGHSSSVPFLSRSLSSIYPSDHQNPISSCSFVSGPLRSSKLDDENENLGNGFFESNCKVLKLKGDGDGDTLGASALALHYANLVMVLEKMIKSPQLVGVDARDDLYGMLPSSIRSSLRARLRGVGFSACDDHVLAGEWRDALGRILGWLAPLAHNMVKWHSERSYEQQNLVPKTNVLLLQTLFFANKEKTEAAITELLVGLNYVWRFEREMTAKALFECTKFNNGFLSLHKPS 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01185 475 PANTHER BNAC09G50660D PROTEIN 18 462 - -
Vian8g01185 475 Coils Coil 192 212 - -
Vian8g01185 475 Pfam Domain of unknown function (DUF3475) 34 89 IPR021864 GO:0045927
Vian8g01185 475 Pfam Protein of unknown function (DUF668) 312 400 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01185 Vian-Chr8 30445455 30446882 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01185 - - gmx:100801628 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01185 8 30445455 30446882 Vian8g01185 8 30445455 30446882 ECH
Vian8g01185 8 30445455 30446882 Vian3g01168 3 12944150 12945589 PCT