Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01168 ATGGCCCTCGAAACGCTCCTTGTCAAGGTCAAAACCGCCATATCAAATAGCTTCGACTCGGTTCCGCCCAAGCTGCTGAAGAAGAAACCCTCGTTCAAGTCCAAACCAAACGTCGGCGTGTTGGCGTTCGAGATCGCCGGCGTCATGTCGAAACTCCTCCATCTCTGGCACTCGCTGTCCGACGCCACCATCGTCCGCATCCGAAACGACGCCGTCAACCTCGAAGGCGTGAGGAAGATCATCTCTAACGACGAGTCCTTCCTCCTCGGACTCGCCTGCGCCGAGTTCGCCGAGTCGCTCCGTGTCGTGGCGAACTCGGTGACCCGACTCGGCGTGCGCTGCGAGGACCCCAACCTGCGCTCCTTCCAGCGGGCCTTCCTCGAGTTCGCGGACTCGGGCTGCGACCCAAAAGAGTGGGCCCTTCCGGGCCCAAAAGAAATCGAATCAAAGCTCAAGAAAATGGAGCGTTACGTGACGCTTACGGCAGCCCTCTACCGCGAAATGGAGGAGCTCACGGTTCTGGAAAGCGGCTTCAGAAAAGCTCTGATCCACGCTGACGCCAACAACGTTGGGAGTAAAGAGCAGCAAAAACTCTATGAACTTCAGCAGAAGATTTTCTGGCAGAAGCAAGAGGTGAAGGATCTCAAAGAAAGATCCCTGTGGAGTAGGAGCTTCGACAGCGTTGTCGTGCTCCTTGTAAGGTTCAGTTTCACTGTTTTAGCTAGGATTAAGGTTGTCTTCGGAATCGGTCACCGCATGCCTTGTCTGTCACGTACCTTATCTACTTCGGCCACTGTTTATCCATCTGATCAAAACCCTAATGATTTTGTTGTTTCTGGGTTATTAGAGGAAGAGTCAAGGTTTGATGAAGCGGTAAATGAAGATGTGGAAAGTGGGTTTTTTGAGGCCAACTCGAAGCTTCTTAAACCACCGGAGAGCACTTTGGGAGCTTCAGGTTTGGCTTTACACTATGCAAATTTGATAATAGTGATGGAGAAGATGATAAAGTCACCTCACTTGGTTGGAGTAGATGCAAGAGATGATTTATATGGTATGTTGCCGAGGAGCATAAGGTGGGGGTTGAGAGGGAGACTGAGAGGGGTGGGGTTTTGTGCTAGTGATCCTGTTCTTGCTGGAGAATGGAGAGACGCCTTGGGAAGGATATTGGGATGGCTATCACCTTTGGCACACAACATGATCAAATGGCAAAATGAGAGAAGCTTTGAACAACACAATTTGGTGGCCAAGACCAATGTATTGCTGTTACAGACTTTGTTCTTCGCCAACAAAGATAAGACTGAGGCTGCCATAACTGAACTTCTGGTGGGGTTGAACTATATTTGGAGGTTTGAGAGGGAAATGACTGCTAAGGCTTTGTTTGAATGCGCCAATTCTAATGGGCTTTTGTTCAAGTTGAATAAACCAGCTAATGAGATATGA 1440 0.4972 MALETLLVKVKTAISNSFDSVPPKLLKKKPSFKSKPNVGVLAFEIAGVMSKLLHLWHSLSDATIVRIRNDAVNLEGVRKIISNDESFLLGLACAEFAESLRVVANSVTRLGVRCEDPNLRSFQRAFLEFADSGCDPKEWALPGPKEIESKLKKMERYVTLTAALYREMEELTVLESGFRKALIHADANNVGSKEQQKLYELQQKIFWQKQEVKDLKERSLWSRSFDSVVVLLVRFSFTVLARIKVVFGIGHRMPCLSRTLSTSATVYPSDQNPNDFVVSGLLEEESRFDEAVNEDVESGFFEANSKLLKPPESTLGASGLALHYANLIIVMEKMIKSPHLVGVDARDDLYGMLPRSIRWGLRGRLRGVGFCASDPVLAGEWRDALGRILGWLSPLAHNMIKWQNERSFEQHNLVAKTNVLLLQTLFFANKDKTEAAITELLVGLNYIWRFEREMTAKALFECANSNGLLFKLNKPANEI 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01168 479 Pfam Protein of unknown function (DUF668) 314 401 IPR007700 GO:0045927
Vian3g01168 479 Pfam Domain of unknown function (DUF3475) 40 95 IPR021864 GO:0045927
Vian3g01168 479 PANTHER BNAC09G50660D PROTEIN 32 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01168 Vian-Chr3 12944150 12945589 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01168 - - gmx:100787581 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01168 3 12944150 12945589 Vian3g01168 3 12944150 12945589 ECH
Vian8g01185 8 30445455 30446882 Vian3g01168 3 12944150 12945589 PCT