Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01155 ATGGCTCACCATACCTCATCAGATCATTCCAATGATCTCAGAAAAGAAGACTGCAAGGAAACAGGTTCACTGGTTGTTTGCTTTGGGGAAATGTTAATAGACTTTGTTCCGACTGTGGGAGGAGTATCGCTGGCTGAAGCACCTGCTTTCAAGAAAGCTCCCGGTGGAGCTCCTGCCAATGTAGCTGTTGGTATCTCTAGATTGGGAGGTTCATCTGCTTTTATTGGCAAGGTTGGAGCAGATGAATTTGGGTACATGCTGGCAGATATTTTAAAGCAAAACAATGTTGAGACTTCTGGCATGCGGTTTGACTCTAATGCAAGAACTGCATTAGCTTTTGTTACACTTAGAGCAGATGGTGAACGTGAATTCTTGTTTTTCCGCAATCCAAGTGCTGATATGCTCCTTCAAGAATCAGAACTTGATAAAAATCTTCTAAAGCAGGCTAGAATATTCCATTATGGCTCCATCAGCTTGATTGATGAGCCATGCAAGTCAGCTCACCTTGCTGCTATGAGAATTGCCAAAAACTCTGGTTGCATTCTCTCTTATGATCCAAATTTGAGATTGGCTCTATGGCCTTCAGCAGATGCTGCTCGGAAAAGCATAATGGATATATGGGATCAGGCTGATGTCACAAAGATAAGTGAGGATGAAATTACATTTTTGACTGGAGGTGATGATCCTTATGACGATAATGTTGTTTTGAAGAAACTTTTTCATCCAAATCTCAAGCTTTTAATCGTTACTGAAGGGTCACAAGGTTGCAGATATTACACCAAAGCATTTAAGGGTAGGATTGCAGGTGTTAAAGTCAAACCTGTAGACACAACTGGTGCTGGCGATGCATTTGTTAGTGGGATTTTATACAGTATAGCTTCTGATCAAACTATTTTTCAGGATGAGAAACGTCTTAGAAAGGCTTTATATTTTGCCAATATATGTGGTGCACTCACTGTGACTGGGAGAGGTGCAATTCCTGCACTTCCTACAAAGGAAGCTATCTTGCAATTCTTACTAGAAGCAGCTGTAATATAA 1038 0.4094 MAHHTSSDHSNDLRKEDCKETGSLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFIGKVGADEFGYMLADILKQNNVETSGMRFDSNARTALAFVTLRADGEREFLFFRNPSADMLLQESELDKNLLKQARIFHYGSISLIDEPCKSAHLAAMRIAKNSGCILSYDPNLRLALWPSADAARKSIMDIWDQADVTKISEDEITFLTGGDDPYDDNVVLKKLFHPNLKLLIVTEGSQGCRYYTKAFKGRIAGVKVKPVDTTGAGDAFVSGILYSIASDQTIFQDEKRLRKALYFANICGALTVTGRGAIPALPTKEAILQFLLEAAVI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01155 345 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
Vian8g01155 345 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Vian8g01155 345 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Vian8g01155 345 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016301
Vian8g01155 345 SUPERFAMILY Ribokinase-like 25 339 IPR029056 -
Vian8g01155 345 Pfam pfkB family carbohydrate kinase 24 331 IPR011611 -
Vian8g01155 345 CDD bac_FRK 24 326 - -
Vian8g01155 345 PANTHER HEXOKINASE FAMILY MEMBER 24 338 - -
Vian8g01155 345 Gene3D - 22 344 IPR029056 -
Vian8g01155 345 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016301
Vian8g01155 345 FunFam Probable fructokinase-2 22 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01155 Vian-Chr8 29999212 30002323 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01155 K00847 - gmx:100778752 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01155 8 29999212 30002323 Vian3g00584 3 5841439 5843399 ECH
Vian8g01155 8 29999212 30002323 Vian8g01155 8 29999212 30002323 ECH
Vian8g01155 8 29999212 30002323 Vian3g00584 3 5841439 5843399 PCT