Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00584 ATGTTAATAGATTTTGTGCCAACAGTGGGTGGAGTGTCACTAGCTGAAGCACCTGCTTTCCAGAAAGCTGCTGGTGGTGCTCCTGCCAATGTGGCTGTTGGCATCGCTAGGCTTGGAGGTTCATCTGCTTTTGTAGGCAAGGTTGGAGCAGATGAATTTGGGTATATGTTGGCTGATATTTTAAAGCGGAATAATGTTGACACATCTGGCATAAAGTTTGATCCTAATGCAAGAACTGCTTTAGCTTTTGTTACACTTAGAGCTGATGGCGAGCGTGAGTTTTTGTTTTTCCGAAATCCTAGTGCTGATATGCTTCTTCAAGAGTCAGAGCTTGCTACCGATCTCATAAAGAAGGCTAAAATATTCCATTATGGTTCCATCAGCTTGATTCACGAACCATGCAAGTCAGCTCATCTTGCTGCTATGAAAATTGCTAAAGACTCTGGTTGCATTCTCTCATATGATCCAAATTTGAGATTGGCACTATGGCCCTCTGCTGAGGCAGCTCGGAATGGCATAAAGAGTGTATGGGATCAAGCCGATGTCATAAAGATAAGTGAGGACGAGATAACATTTTTGACTGGTGGTGATGATCCTTACGATGATGATGTTGTATTAAAAAAGCTTTTTCACCATAATCTTAAGCTTTTAATCGTTACTGAAGGGTCAGGAGGTTGTAGATATTACACACAGGAATTTAAGGGCAGGGTTGCAGGTGTTAAAGTTAATGCTGTTGACACAACTGGTGCAGGGGATGCATTTGTTAGTGGGATTATCTATAACTTAGCTTCTGACCAAAGTATTTTCCAGAATGAGGAACGTCTCCGAAAAGCTCTGTATTTTGCGAATGTATGTGGTGCCATCACTGTAACAGCGAGAGGGGCAATTCCTGCACTACCCACAAAAGAAGCTGTCCTGCAATTCGCTGAAACATAA 936 0.4231 MLIDFVPTVGGVSLAEAPAFQKAAGGAPANVAVGIARLGGSSAFVGKVGADEFGYMLADILKRNNVDTSGIKFDPNARTALAFVTLRADGEREFLFFRNPSADMLLQESELATDLIKKAKIFHYGSISLIHEPCKSAHLAAMKIAKDSGCILSYDPNLRLALWPSAEAARNGIKSVWDQADVIKISEDEITFLTGGDDPYDDDVVLKKLFHHNLKLLIVTEGSGGCRYYTQEFKGRVAGVKVNAVDTTGAGDAFVSGIIYNLASDQSIFQNEERLRKALYFANVCGAITVTARGAIPALPTKEAVLQFAET 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00584 311 SUPERFAMILY Ribokinase-like 2 308 IPR029056 -
Vian3g00584 311 Pfam pfkB family carbohydrate kinase 2 301 IPR011611 -
Vian3g00584 311 PRINTS Ribokinase signature 20 39 IPR002139 GO:0016301
Vian3g00584 311 PRINTS Ribokinase signature 175 190 IPR002139 GO:0016301
Vian3g00584 311 PRINTS Ribokinase signature 217 228 IPR002139 GO:0016301
Vian3g00584 311 CDD bac_FRK 1 296 - -
Vian3g00584 311 PANTHER HEXOKINASE FAMILY MEMBER 1 309 - -
Vian3g00584 311 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 25 49 IPR002173 GO:0016301
Vian3g00584 311 FunFam Probable fructokinase-2 1 311 - -
Vian3g00584 311 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 246 259 IPR002173 GO:0016301
Vian3g00584 311 Gene3D - 1 311 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00584 Vian-Chr3 5841439 5843399 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00584 K00847 - gmx:100818404 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01155 8 29999212 30002323 Vian3g00584 3 5841439 5843399 ECH
Vian3g00584 3 5841439 5843399 Vian3g00584 3 5841439 5843399 ECH
Vian8g01155 8 29999212 30002323 Vian3g00584 3 5841439 5843399 PCT