Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01150 ATGCAGACCCTTGATGAGGCCTCACAAAAGTGCCCTCAATGCTGTTGCAGCTGCACAACCCCGTTTTTCAACTCTACAATTTCATCACGCAACACAACAGCAAAACTCAGGAACAGTTCTGCAGAGTGGCGCCACAGTTTTGCAGTCACAACAACATCATCTATATTCCCAAACACTCAATTTACAAACCATGAGTCTCTTCCATCACTTCATGAATCATTCAATGAGTTCAACAAAGTGTTCCCTCAGTATTCTGATACTGAACAAGTTGACTATGTTAGAGCCAAGGACTATTTCCACCTGTCACTCTCCAGCCAAACTTGCCTTGATTACATTGGCATTGGCCTTTTCTCTTGCTCTCAGCTTCAACACCATGACTCATCAAAAGGCCAATTACCCTCTTCTTCAGTTCCTCAGACACCCCAATTTCAACCTAATTACTCAGATATTCCTTTCTTTAGGATACACTCCAAAACTGGTAGCTTAAAGACTTTGTTGCTTCATGGGGGACAAGACTCAGAATTTGAGGGTGCAATGAGAAAGAGAATCATGAGTTTCCTTAACATATCAGAAAATGACTACTTTATTGTTTTCACAGCAAACAGAACCTCAGCTTTCAAACTTGTGGCAGATTCATACCAATTCCAAACTAGTAGGAGGCTTCTGACAGTTTATGACTATGAGAGCGAGGCGGCGGAAGCAATGATTAGTTCCTCAGAGAAGAGAGGTGCCAGGGCCATGTCAGCGGAGTTCTCATGGCCTAGGCTGAGGATTCAGTCAAAAAAGTTGAGGAAGATGATTGAGAGTAGGAGAAAGAAGAAGAAAAGAAAAGGCCTCTTTGTTTTCCCACTTGGTTCAAGAGTGACAGGAGCAAGATATCCTTATCTGTGGATGAGCATAGCACAGGAGAATGGATGGCATGTGTTGGTTGATGCATGTGCATTGGGGCCAAAAGACATGGACTGCTTCGGCCTCTCTCTATTTCAACCAGATTTTCTTATTTGCTCTTTCTACAAGGTCTTTGGGGCAAACCCTTCTGGATTTGGATGCCTTTTCATCAAGAAATCTGCCATTTCCAGCTTGGAATCTTCCCCTTCAGCAGGAATTGTCAGCCTTGTACAAGAAAAGCAGCCTCGTCAATTATCAGATTATTCTTCTGCCACTGACTTAGAACTTATACACAATACAACATCAACATCCCCACATGAAGAGAAACCATTTCCTTTGTCATCTTTATCGGGTCCAATGCAAACTAAACAATCTGAAATAGTTGAAGAAGGAGAAGCAACTGACTCAAATCTAAAAGCTCCTCAAGGTTCTGAAATTGAGGAGATACAAGAGCCAGTTCAGACCCTTAAGAAAAGTAATGTCCAAGAAAGTGGCATCCAATGTGGGTGCTTAGACCAAGTTGATTCTTTGGGATTGATTCTGATCACTAACAGGTCAAGGTACCTTATCAACTGGCTGGTAAACTCTATGTTGAAGCTTAAGCATCCTAATACACAAGGGGTTCCTTTGGTCAAGATTTATGGTCCAAAGGTGAAATTTGACAGAGGGCCAGCTTTGGCATTCAATATATTTGATTGGAAAGGTGAAAGGGTTGAGCCTGCACTTGTCCAGAAACTTGCTGATAGAAGCAACATCTCTATCAGTTATGCATTCCTGCGTCATATTTGGTTTGCAGATAAGTATGCAGAAGAGAAGGGAAAAGTCCTACAAACCAAAGTGGTGACAGCAACCAACAAGAAGAAAGACAGGGTTGGAATCACTGTGGTTACTGCTGCCCTTGGCTTCCTTGCTAATTTTGAAGATGTGTATAAGCTTTGGGCTTTTGTTGCTAGATTCCTGGATGCTGACTTTGTGGAGAAAGAGAGGTGGAGATATCTTGCCATCAACCAAAAAACAATTGAGGTTTAG 1917 0.422 MQTLDEASQKCPQCCCSCTTPFFNSTISSRNTTAKLRNSSAEWRHSFAVTTTSSIFPNTQFTNHESLPSLHESFNEFNKVFPQYSDTEQVDYVRAKDYFHLSLSSQTCLDYIGIGLFSCSQLQHHDSSKGQLPSSSVPQTPQFQPNYSDIPFFRIHSKTGSLKTLLLHGGQDSEFEGAMRKRIMSFLNISENDYFIVFTANRTSAFKLVADSYQFQTSRRLLTVYDYESEAAEAMISSSEKRGARAMSAEFSWPRLRIQSKKLRKMIESRRKKKKRKGLFVFPLGSRVTGARYPYLWMSIAQENGWHVLVDACALGPKDMDCFGLSLFQPDFLICSFYKVFGANPSGFGCLFIKKSAISSLESSPSAGIVSLVQEKQPRQLSDYSSATDLELIHNTTSTSPHEEKPFPLSSLSGPMQTKQSEIVEEGEATDSNLKAPQGSEIEEIQEPVQTLKKSNVQESGIQCGCLDQVDSLGLILITNRSRYLINWLVNSMLKLKHPNTQGVPLVKIYGPKVKFDRGPALAFNIFDWKGERVEPALVQKLADRSNISISYAFLRHIWFADKYAEEKGKVLQTKVVTATNKKKDRVGITVVTAALGFLANFEDVYKLWAFVARFLDADFVEKERWRYLAINQKTIEV 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01150 638 Gene3D - 168 392 IPR015421 GO:0003824
Vian8g01150 638 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 71 598 - -
Vian8g01150 638 MobiDBLite consensus disorder prediction 396 441 - -
Vian8g01150 638 MobiDBLite consensus disorder prediction 396 420 - -
Vian8g01150 638 SUPERFAMILY PLP-dependent transferases 178 366 IPR015424 -
Vian8g01150 638 Pfam Aminotransferase class-V 179 370 IPR000192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01150 Vian-Chr8 29907417 29909333 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01150 - - gmx:100790494 1095.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01150 8 29907417 29909333 Vian3g00592 3 5909705 5911657 ECH
Vian8g01150 8 29907417 29909333 Vian8g01150 8 29907417 29909333 ECH
Vian8g01150 8 29907417 29909333 Vian3g00592 3 5909705 5911657 PCT