Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00592 ATGCAGTCCCTTGGTCAAAACGAGGGCTCCCTATCATGCCCTCAAGGTTGTTGCCCTACTTTATTGTTCAATCCTCCACCACCTCAATCTCAGAACACAACAACCAAACCCAGAAACAGTTCTGCAGAGTGTCGCCACAGCTTTGTAGCCACGACGTCATCCTATATCTTCCCAAACACCAAATTCACCAACCACGAGTCCCTTCCTTCTCTTCATGAATCATTCGGTGAATTCAAGAAAGTGTATCCTCAATACTCCGAAACTGACCAAGTGGACCATTTAAGAGCTAAGGAATATTACCATCTCTCTTTCTCCAACCAATCATGCCTTGACTACATTGGTATTGGCCTCTTCTCTTATTACCAACGCCAACACCATCATGACACCTCAAAAACCCAACTTGCCTCTTCTTCAACACCTCTATCCCCTCCCCAATATTCGGATATTCCCTTCTTTAGCATATCCTACAAGACTGGGAATCTGAAAACACTTTTGCTTCATGGAGGGCAGGAGTCAGAGTTTGAGTCTGCCATGAAGAGAAGAATAATGAAGTTTCTCAACATTTCTGAAAATGACTACTTCATGGTTTTCACAGCAAACAGAACTTCAGCTTTCAAACTTGTGGCAGACTCGTATCCATTCCAATCTAGCAAGAAGCTTCTGACAGTTTATGACTATGAGAGTGAGGCAGTGGAAGCAATGATCTGTTGCTCGGAGAAGAGAGGAGCCAAGGCCATGTCAGCAGAGTTCTCATGGTCAAGGCTGAGGATTCAGTCAACAAAACTGAGGAAGATGATTGTTAGCAAGAAGAAGAAGAAAAAGAAGAGGGGTCTCTTCGTATTTCCACTTCACTCCAGGGTAACAGGAGCAAGATATCCTTACCTGTGGATGAGCATAGCACAGGAGAATGGATGGCATGTGTTGATTGATGCTTGTGCATTGGGTCCCAAAGACATGGATAGCTTTGGCCTATCTCTCTTTCAACCCGACTTTCTCATCTGCTCATTTTACAAGGTCTTCGGAGAAAATCCATCAGGGTTTGGATGCCTTTTTGTCAAGAAATCTGCTATTACCACTCTTGAATCCTCTTCTTGCGCAGGAATTGTGAACCTCGTACCAGATAGGTTTCTACGTCAGTCATCAGAAGATAAGTGTTCTTCTGGGAACTGCAAACAAAAACCATTATCTAGCTTGCAAGACCAAGATTTGTCTTCCTTAAATTCTTTCTCTGGTCGGATACAAACTTCGGAAGCTTTAAAAGTTGAAGAAGAATCATGTGAGCTTCAGATCATGGTGGCAGCAGCAGAGCCAGAAAAAGGCTCTGGAAGTGTTGAAGCAAAAGAAGTGGTTGAGAGCCTTCAAAATAAGAAAGCAGAACATGGTGAGAACGGGGGATTTAACATTGAATGCAGATGTTTGGATCAAGTGGACTCTTTGGGATTGACAATGATCACCAATAGAACAAGGTACCTGATAAATTGGCTGGTGAACTCCATGATGAAGCTGAAGCACCCTAATGCAGCAGGGGAACCACTAGTGAAGATTTATGGCCCAAAGGTAAAATTTGATAGGGGGCCTGCTTTGGCATTCAATGTGTTTGATTGGAAAGGCGAGAAGGTTGAGCCCGTCCTTGTGCAGAAACTTGCTGATAGGAACAATATATCTCTCAGCTATGGGTTTCTGCATCATATTTGGTTTGCAGATAAGTATTCAGAAGACAAGGGAAAAGTTCTACAGACCAAAGAAGGAAGAGGCCGGGGACTAACCACCAACAAGAAGAAAGATAGGGATAAACTAGGAGTAACAGTAGTTACTGCTGCATTAAGTTTCCTGGCTAATTTTGAAGATGTATATAAACTATGGACTTTTGTTGCCAGGTTCCTTGATGCTGATTTTGTGGAGAAGGAGAGATGGAGATACACTGCTCTAAATCAGAAAACAATTGAAGTTTAA 1953 0.4286 MQSLGQNEGSLSCPQGCCPTLLFNPPPPQSQNTTTKPRNSSAECRHSFVATTSSYIFPNTKFTNHESLPSLHESFGEFKKVYPQYSETDQVDHLRAKEYYHLSFSNQSCLDYIGIGLFSYYQRQHHHDTSKTQLASSSTPLSPPQYSDIPFFSISYKTGNLKTLLLHGGQESEFESAMKRRIMKFLNISENDYFMVFTANRTSAFKLVADSYPFQSSKKLLTVYDYESEAVEAMICCSEKRGAKAMSAEFSWSRLRIQSTKLRKMIVSKKKKKKKRGLFVFPLHSRVTGARYPYLWMSIAQENGWHVLIDACALGPKDMDSFGLSLFQPDFLICSFYKVFGENPSGFGCLFVKKSAITTLESSSCAGIVNLVPDRFLRQSSEDKCSSGNCKQKPLSSLQDQDLSSLNSFSGRIQTSEALKVEEESCELQIMVAAAEPEKGSGSVEAKEVVESLQNKKAEHGENGGFNIECRCLDQVDSLGLTMITNRTRYLINWLVNSMMKLKHPNAAGEPLVKIYGPKVKFDRGPALAFNVFDWKGEKVEPVLVQKLADRNNISLSYGFLHHIWFADKYSEDKGKVLQTKEGRGRGLTTNKKKDRDKLGVTVVTAALSFLANFEDVYKLWTFVARFLDADFVEKERWRYTALNQKTIEV 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00592 650 Pfam Aminotransferase class-V 177 367 IPR000192 -
Vian3g00592 650 Gene3D - 164 388 IPR015421 GO:0003824
Vian3g00592 650 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 73 610 - -
Vian3g00592 650 SUPERFAMILY PLP-dependent transferases 134 369 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00592 Vian-Chr3 5909705 5911657 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00592 - - gmx:100820534 1150.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01150 8 29907417 29909333 Vian3g00592 3 5909705 5911657 ECH
Vian3g00592 3 5909705 5911657 Vian3g00592 3 5909705 5911657 ECH
Vian8g01150 8 29907417 29909333 Vian3g00592 3 5909705 5911657 PCT