Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01087 ATGAAAAAGCCTGCACTGAAGGTAGCTCTGGTGCCAGATAATGTTGGGAAGCCTACGGTGAAACTAGAGAAAGTTGCTGTCCAGGATGGAACCTGTTCATGGGAGAATCCGATTTTTGAATCAGTAAAATTTGTTAGGGACGCAAAATCAGGAAAACTTCAAGAGAAAATCTACCATTTTGTTGTTTCAACCGGATCTTCAAAATCTGGCTTTCTTGGAGAATCCTCCATTGATTTTGCTGATTTTGCTGCAGAAACTGAGCCACTGACTGTGTCCCTACCTCTGAAGTTTGCCAATTCAGGCGCAATCCTACATGTGACAATTCAGAACGTGGAAGGAGTACAAAGAGATCAAAGTACTTTCAGAAATGGGGAAGATTATGGAAATGGAAGCTCAAGACACCTACTGAGCATTTGCAGTGCAGATGAAATTTCTCGTAATGTTTATGAAGATTTCCCCAAGCTATTACCACCCTTGAGGCAAAATTCAATGCCGTGCAAAGGAACTATTGAGGCCATTGCAGCAAGAGCTCAAATGCATAGGGGGTCACTGGGTTCAGCATCAGATAGGAGTTTAGGCGACTCCTGGAGAAACAGCCTGGAAGAAACTCATCCTCAAGAAGGATTACAAGAGCCTTCAGATAATGTCATTGAAAACCTCAGAAGTGAAATTGCTTCTCTGAAGAGGAAAGCCGAAGAATCAGAACTAGAGTTACAATCGCTTCAGAAGCTGATGGAGAAGGAATGCAGCCGAGGACAAAGTATGTCGAGGCAAATAATCAGCCTCAGAGACGAGAGAAATATGATCAAAACTAAATATGAGCAACTAATGTCGCAGCAAAATCTCATTAACGAGACCAAAAATTCAAAAGCCTTACAGACTGAGATTGAACAAGCGAGGCAGCAGTTAGAAGCAATAAAAGAAGAGCTTTCTTATGAAAAAGAGTTTAGTTCTAATCTTAAATTGCAACTCCAGAAGACACAAAACTCAAACTCCGAACTACTTTTAGCAGTTAGAGAACTTGAAGCAATGCTGGAAGGTAAGAATAAGGAATTGTTGGACAATACTACAGAGAATGATGATGCCACAGAATTAGGTCACTTGAAGCAGAAAATTGCAGAACTAAATGGAGAAATAGACATTTGTTATAAGCAACGTGATGAGCTAAATGAGCAAATAAAAGAGCTCAACTTTGGGTGTGAGCGTCTGAAGAAAGAAAACCAGGATATCTCTTTGAGATTAAACCATAAAGAAGCACAACAAATTGCGTTGCAAAATAAATATTCAGCTTCTTTGGCAACTATAAAACAACTTGAATCTCAAGTACAGGGATTAGAAGAAAAGATAGGGAAGCAGGTGGATGATTTTTCAGGGTCTTTGATTTACATCAATGAGCTTGAAAATCAAGTCGGTGATTTGAAGAGAGAAATGAAAATACAAGAGGATTATCAAAAAGATTTCCAAGCCATGAAATGTGCAAAACTTGAACAGGAAGAACGGGCCATCCAAGCAGAGGAGACATTGATAAAGACTAGACACAACAGTGATCTCGCATGTCAGCGTTTTCAGGATGAATATCGAAGTCTTTCAGCTGAAATGACATTGAAAGTAGAAGAAAACGAAAAAAAGGTCCTTGAAGCTTATGCAGAAGCTGATGAATTGCAGAAGCAGAACAAACTCATGGAAGAAATTCTCCAGAAATGCAATGAAGAGCTCAGGCTTGTTACAAATCAGAATGAATTGAAACTTCAACAGCTCTTGAACCAAATAGATTCAAAAGAAAAGAAAGTGGAAATGATGTCTCAAGAACTAGAGATTAAGTCCAAGCAACTTGAAGATGTACAAAGGAAAAGGGATGAAAAGGATAAGGCATTAACAAAGCAAATTCAATTGCTCAGAATCGAAATTAGAAAGCTGATGCTAGAAGAGCATGCGTTATCTAAAGCTGATCCAACAGAGCTCATGACTAGGATGTTAATGCAAGAGAACAATGATGAGGAGATAAGGTTTGACAACCTAACGTCAGCATTAGAAATCTTTAAGAACCAGCACAATGAATTAAAACATAACTTGCACGTGGAACAAACAGAGAAAGAAAATATGCAGGAAAAAATATCTCAATTAGAAGGAGAGCTGAAGAAAAAGGTAGAAGAACTAAGTGCTGTAGAAAAGAGGCTCAAAAATAGCAAAGGAGAAACGGCCAAAAGTATGAATTTGGCTTCATGGAACTACGAGAGTGCTGCGTCTTGTTCATCCACTAAGGAACACGATAAGAAGTCAAGATCGGAAATGCAGATGGGAATGGATGATGCAAACACCCCTGTTCGAAAGTGTGAAAAAGGAAGAACCATATGCAATTCAGCCGAGAACGAAGTTCATCTAGCTTCACACGGAAGCGAAGTGAAAACTTTCTTGGAAAATAAGGCTATTGTCTTCAATTATGATGATGCTGGTGATTGTCCTACAAATGAGTTGTTGGATGAAGTGGCAGTACTAAAGGAAAGGAACAAATATATGGAAACTCAGCTGAAAGAAATGGAAGAAAGATATTCTGATATTAGTCTTAAGTTCGCAGAGGTGGAGGGAGAAAGACAACAGCTTGTTATGGCCCTACGGAATATGAGGAATGGTAAGAACTAG 2640 0.3909 MKKPALKVALVPDNVGKPTVKLEKVAVQDGTCSWENPIFESVKFVRDAKSGKLQEKIYHFVVSTGSSKSGFLGESSIDFADFAAETEPLTVSLPLKFANSGAILHVTIQNVEGVQRDQSTFRNGEDYGNGSSRHLLSICSADEISRNVYEDFPKLLPPLRQNSMPCKGTIEAIAARAQMHRGSLGSASDRSLGDSWRNSLEETHPQEGLQEPSDNVIENLRSEIASLKRKAEESELELQSLQKLMEKECSRGQSMSRQIISLRDERNMIKTKYEQLMSQQNLINETKNSKALQTEIEQARQQLEAIKEELSYEKEFSSNLKLQLQKTQNSNSELLLAVRELEAMLEGKNKELLDNTTENDDATELGHLKQKIAELNGEIDICYKQRDELNEQIKELNFGCERLKKENQDISLRLNHKEAQQIALQNKYSASLATIKQLESQVQGLEEKIGKQVDDFSGSLIYINELENQVGDLKREMKIQEDYQKDFQAMKCAKLEQEERAIQAEETLIKTRHNSDLACQRFQDEYRSLSAEMTLKVEENEKKVLEAYAEADELQKQNKLMEEILQKCNEELRLVTNQNELKLQQLLNQIDSKEKKVEMMSQELEIKSKQLEDVQRKRDEKDKALTKQIQLLRIEIRKLMLEEHALSKADPTELMTRMLMQENNDEEIRFDNLTSALEIFKNQHNELKHNLHVEQTEKENMQEKISQLEGELKKKVEELSAVEKRLKNSKGETAKSMNLASWNYESAASCSSTKEHDKKSRSEMQMGMDDANTPVRKCEKGRTICNSAENEVHLASHGSEVKTFLENKAIVFNYDDAGDCPTNELLDEVAVLKERNKYMETQLKEMEERYSDISLKFAEVEGERQQLVMALRNMRNGKN 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01087 879 Coils Coil 463 483 - -
Vian8g01087 879 Coils Coil 372 420 - -
Vian8g01087 879 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 19 109 IPR019448 -
Vian8g01087 879 Coils Coil 217 251 - -
Vian8g01087 879 Coils Coil 537 624 - -
Vian8g01087 879 ProSiteProfiles C2 NT-type domain profile. 1 112 IPR019448 -
Vian8g01087 879 Coils Coil 282 309 - -
Vian8g01087 879 MobiDBLite consensus disorder prediction 181 212 - -
Vian8g01087 879 Coils Coil 428 455 - -
Vian8g01087 879 Coils Coil 670 732 - -
Vian8g01087 879 Gene3D - 300 457 - -
Vian8g01087 879 Coils Coil 829 863 - -
Vian8g01087 879 Coils Coil 324 351 - -
Vian8g01087 879 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 821 878 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01087 Vian-Chr8 28703875 28708301 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01087 - - vum:124822141 1380.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01087 8 28703875 28708301 Vian3g00625 3 6310649 6313991 PCT