Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00625 ATGGCGAGGACCAGATCTGAGTATTCTGAACAAGATGCATCTAATGGCATTAGTCCTGTGTTAGCTTCATGGGAGGATCCTCATAGCTTCAGACAAAATTCAATTCCATCAAAAGGAACTGTTAAAGCCATTGCAACAGAAGCCCAGGTGCATAAGAGGTCAAACACGAACTGGTCAATGGGTTCGGCATCAGATGGAAGTTTAGGTGACTGGACTAACAGCCTGGAAGACAATCCTCCAAGAGAAAGATTACAAGAGCCTTCAAATAATTCCAATGAAAGCCTAAAGAATGAAATTACTTCTTTGAAAAGGCAAGCAGAAGTGTCAGAAATAGAGTTACAATCACTTCGAAAGCAGATAGAAAAAGAAAGCAGTAGGGGACAGAATTTGTCAAGACAAATAATCAGCCTCAGAGAGGAGAGAGATTTGCTCAAAACCAAATACGAGCAACTCAAGTCCCAGCAGAACTTCAGTAATGAGTCCAAAACCTCCAAAACCTCCAAAACCTTGAAGTCTGAGATTGAAGATACTAGGCTTCAGTTAGAGGCAATGAAGGAAGAGCTTGTTTATGAAAAGGAATTGAGTGCCAATCTTCAATTGCAACTGCGGAAGACACAAAACTCAAACTCTGAATTACTTTTGGCTGTGACAGACCTTGAAGCAATGCTGGAACAAAAGGATAAGGAAATATTGGATCTATCTACGAATATAAAATCCCAGAAGACTACTAAAGAGCGTGAAGAGGGCATAGAATTTGACCTCTTGCGGCTAAAAATTGCAGACCAGGATGAAGAAATAGACAATTACTGTAAACAACGCGAAGAGCTCAGTGAGCAAATTAAAGAACTTACTTTGGAGTATGATCTACTTAAGAAGGAAAATGTGGACATATCTTTGAGATTAAAGCAAGATGAAGCACACCACATCAAGTTACAAAATGAACATTCATCTTCTTTAGTTACAATACAACAACTTGAATCCCATGTAGAGAGATTAGAAGAGAAGCTAAAGGTGCAGGAAGATGAATTTTCAGCATCTCTGGTCTACATAAAGGAACTTGAAGATGAAGTTAAGTCGTTGGAGAAAGAACTGAAAACACAGGCAGAGAAATTTGAAGAAGATCTCCATGTCATGCAATGTGCAAAAACTGAGCAGGAAGAAAGGGCCGTGCAAGCAGAAGAAGCCTTGAGAAAGACAAGACACAACAATGCTGTAGCATCCGAGCGTTTTCAGGAGGAATATAGACTGCTTTCTGTTGAAATGGCACAAAAAGTTGAGGAGAATGAAAATATGACTTTGAAAGCAGTTGCAGAGGCTGATGAGTTGCGGCACCAGAACAAACTTATAGAAGAAATGCTCCATAAATGCAATCAAGAGCTCAGGCTTATCACAGATCAGAATGAAGTGAAAATGAAAGAGCTCTTGGACCAAAGAGACTCAAAAGCAAAAATAATAGAACAGATGTCACAAGAACTAGAAGTTAAGTCTAAACAACTTGAGAATGTGCAAAGGCACTATGATGAAAAGGATGCTTTGTTTTCCAAGCAAATTCAAATGCTCAGATCTCAAATTAGAATGTTGATGGAAGATGGTGTATTGTCTGAAAAAGTAAGGGAGGATGCAAAAATAGCTCAGAAAGGACAACCATTTATGATCTCAAATGACGGGGAGATGATACTTGGCACTCTATTGTCAGAAGTAGAAACCTTTAAGAACCAGCATATTGAAATAAAACACGGTTTGCATAAAGAACAAATGGAGAAAGAAAGTATGAAGAAACAAATATCTCAATTAGAAGGAGAGCTGAAGAAGAAGGAAGCAGATTTAAGTACTATGGAAAAGAAGCTCAAGAATAACAAAGGACGAGCTGCAGTTACACATATGAATTTGACATCAAGAGACAATGAAAGTGCGGTGCCTCCAGCTAAAACACATGCCAAGAAGTCAAAATCCGAAATGCATAAGGGAAAGGATGCTTCAAGCAAGTCCGAAGGAGGAACAGTAAACAAGTCAGATGAGAGCAAAGTTTGTCAAGCTTCTGGAAGCGAGGGTGAGTGCCTTACAAATGAATTGTTGAATGAAGTTTCGCTACTAAAGGAAAAGAACAAGATCATGGAGAATGAGCTGAAAGACATGGAGGAAAGATATTCAGAGATTAGTCTGAAATTTGCAGAGGTAGAGGGAGAAAGACAACAGCTTGTTATGGCTGTACGCAATCTCAAGAATGGGAAGAAGAACTAG 2241 0.3913 MARTRSEYSEQDASNGISPVLASWEDPHSFRQNSIPSKGTVKAIATEAQVHKRSNTNWSMGSASDGSLGDWTNSLEDNPPRERLQEPSNNSNESLKNEITSLKRQAEVSEIELQSLRKQIEKESSRGQNLSRQIISLREERDLLKTKYEQLKSQQNFSNESKTSKTSKTLKSEIEDTRLQLEAMKEELVYEKELSANLQLQLRKTQNSNSELLLAVTDLEAMLEQKDKEILDLSTNIKSQKTTKEREEGIEFDLLRLKIADQDEEIDNYCKQREELSEQIKELTLEYDLLKKENVDISLRLKQDEAHHIKLQNEHSSSLVTIQQLESHVERLEEKLKVQEDEFSASLVYIKELEDEVKSLEKELKTQAEKFEEDLHVMQCAKTEQEERAVQAEEALRKTRHNNAVASERFQEEYRLLSVEMAQKVEENENMTLKAVAEADELRHQNKLIEEMLHKCNQELRLITDQNEVKMKELLDQRDSKAKIIEQMSQELEVKSKQLENVQRHYDEKDALFSKQIQMLRSQIRMLMEDGVLSEKVREDAKIAQKGQPFMISNDGEMILGTLLSEVETFKNQHIEIKHGLHKEQMEKESMKKQISQLEGELKKKEADLSTMEKKLKNNKGRAAVTHMNLTSRDNESAVPPAKTHAKKSKSEMHKGKDASSKSEGGTVNKSDESKVCQASGSEGECLTNELLNEVSLLKEKNKIMENELKDMEERYSEISLKFAEVEGERQQLVMAVRNLKNGKKN 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00625 746 Coils Coil 439 459 - -
Vian3g00625 746 MobiDBLite consensus disorder prediction 640 661 - -
Vian3g00625 746 Coils Coil 209 236 - -
Vian3g00625 746 Coils Coil 322 342 - -
Vian3g00625 746 MobiDBLite consensus disorder prediction 624 638 - -
Vian3g00625 746 Coils Coil 167 187 - -
Vian3g00625 746 Coils Coil 350 402 - -
Vian3g00625 746 Coils Coil 92 154 - -
Vian3g00625 746 Coils Coil 688 729 - -
Vian3g00625 746 MobiDBLite consensus disorder prediction 662 676 - -
Vian3g00625 746 MobiDBLite consensus disorder prediction 49 74 - -
Vian3g00625 746 Coils Coil 581 622 - -
Vian3g00625 746 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 684 746 - -
Vian3g00625 746 Coils Coil 471 505 - -
Vian3g00625 746 MobiDBLite consensus disorder prediction 1 94 - -
Vian3g00625 746 MobiDBLite consensus disorder prediction 616 676 - -
Vian3g00625 746 Coils Coil 259 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00625 Vian-Chr3 6310649 6313991 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00625 - - vun:114190970 1309.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00625 3 6310649 6313991 Vian3g00625 3 6310649 6313991 ECH
Vian8g01087 8 28703875 28708301 Vian3g00625 3 6310649 6313991 PCT