Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01067 ATGGCCCTTAACATTAGCTTGAGATGTTTGGCAATGGTTGCCATTGCATTTTTCTTCACAGTGCAAGGAACTCTTGGGGAGGTAGAATGCGAGCGTTTGAGCGAGGACACGTGTGCATTTGCGGTGTCGTGGGAGGGAAAACGGTGCGTGCTGGAGAAGCGTGTGAAGAGGAGCGGGGAAGAGGCTTACACGTGCCGGACCTCGGAGATTCAAACGGAAACACAAAACGGACTCATTGAAACGGAGGACTGCATAAAGGGTTGTGGTTTGGACAGAAAATCCTTTGGAATCTCTTCGGATTCTCTTCTTGAAGTTGGGTTCACCAAAAACCTATGCTCCCCTCACTGCTACCAAAACTGTCCCAACATTGTTGACCTCTATTTCAACCTTGCTGCGGGTGAAGGTGTGTTTCTTCCCAAACTGTGTGCATCAGAAGGTGCAGATGCTCGTCGACAAACGGCTGAGATCAGAAGCTCTGGTGTGGTGGCATCAGGACCACTGAACTCTCTGCAATTCACTGCAACTTCTCCACAACCGTTTGATGCTGTGGAACTCACAAATGAACCCGCAGTTGCTCCATTCCCGCAGTACTGA 594 0.4983 MALNISLRCLAMVAIAFFFTVQGTLGEVECERLSEDTCAFAVSWEGKRCVLEKRVKRSGEEAYTCRTSEIQTETQNGLIETEDCIKGCGLDRKSFGISSDSLLEVGFTKNLCSPHCYQNCPNIVDLYFNLAAGEGVFLPKLCASEGADARRQTAEIRSSGVVASGPLNSLQFTATSPQPFDAVELTNEPAVAPFPQY 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01067 197 PANTHER PAR1 PROTEIN 11 193 IPR009489 -
Vian8g01067 197 Pfam PAR1 protein 28 193 IPR009489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01067 Vian-Chr8 28175724 28176865 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01067 - - var:108345277 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01067 8 28175724 28176865 Vian8g01067 8 28175724 28176865 ECH
Vian8g01067 8 28175724 28176865 Vian3g00635 3 6397549 6398282 PCT